Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1593 ATGACAGCAATAAAGCTCTTCATTTTCTTCTCTCCTTCCAGCTTTCATGGCGGACTCAAGCTAGCAAGTCTCCTCCGCTTTCCCAGAAGAAATAATCTTAATCATACATGTTTCTCTGTTTTTCCCTTTCTCCAAGGAATCAGGAAGTCTCTAGCTGAAATTTTCTTGGACATCAAAGAGCCTAACAACATGCTTCGCCCAGAATTTATTGGGGATACTCTAAAATTAATCACAAGGTTACTGATATTCCTCGGTGTCTTGAGACTCAGTTCTGCAATCACAAATCCTGATGTGGAAGGTGAAGCTTTGGCTGAAGTTAGGAACGCTCTCCATGATCCCAACCATCAAATGGCGGATTGGAACTATTTTTTTGTGTCTGCATGCGTTAGTTGGTCCCATGTCACTTGTAGAAATGGACACGTTATAGCTCTGAGCCTGGGTTCATATGGACTTTCTGGAACAATATCCCCTTCAATAACCAGATTGAAGTATTTGTCTAGCTTAGAATTGCAGAACAACAAATTCACAGGCCCGTTACCTGATTACATTGCCAATCTGACACAACTTCAATATCTCAATCTAGGAGACAACGATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAACTTCAAAGTCTAAAGAATCTGATCTTGAGAGGGAATGATTTATCCGGACCCGTACCAGATACTCTTGCTAACATTAGTGGATTAGCAGAATTGGATCTATCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACAACTTCATTGTGGATCTCACTTAGAACGGCATTGTGTTTCGAATTCTGCTACCCCAGCTTCTACCAACAAATCAAAAGTTGCAGTGGTTGTAAGTTTTGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATGTTTGCATATAGATACCGTTACATACAGAGACACAAAAATGAAGTTTTCTTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGCGAGAGCTACAACTTGCCACTAAAAATTTCAGTGAAAGCAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCGGATGACACCAAAGTTGCAATCAAACGTCTAGTTGATTATAATAATCCTGGTGGAGAGGCTGCGTTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATTGGATTCTGCACAACCTCTACTGAGAGAATCCTTGTTTACCCTTTCATGGAAAATCTAAGCGTCGCATATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAGCAAGGAAGCGTGTGGCTTTTGGTACAGCTCATGGCTTGGAGTATCTCCATGAGCAATGTATTCCCAAGATTATACACAGGGATTTGAAAGCTGCAAACATCTTATTAGACAATGACTTTGAAGCTGTACTTGGAGATTTTGGATTGGCTAAGCTTGTTGATACAAGATTGACCCATGTTACCACTCAAGTGAGAGGCACAATGGGTCATATTGCCCCAGAATATCTGTCCACAGGAAAATCATCTGAGAAAACCGATGTCTTTGGATACGGCATAACTCTTCTTGAACTCGTCACCGGTCAGCGCGCCATAGACTTGTCCCGGCTCGAAGAGGAGGAGGATGTTCTTCTGCTTGACCATATAAAGAAGCTGCTGAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAATCTGGAGAGTTATGATCCAAAAGAAGTGGAAACAATAGTGCAAGTCGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAACATGCTGCAGGGAGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGCGCAATTGGAAGAGATCAGTAATCAGGAATTCTCATCTATTTCCCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCCATACAGCTTTCCACTGCAAGATGA 2046 0.4252 MTAIKLFIFFSPSSFHGGLKLASLLRFPRRNNLNHTCFSVFPFLQGIRKSLAEIFLDIKEPNNMLRPEFIGDTLKLITRLLIFLGVLRLSSAITNPDVEGEALAEVRNALHDPNHQMADWNYFFVSACVSWSHVTCRNGHVIALSLGSYGLSGTISPSITRLKYLSSLELQNNKFTGPLPDYIANLTQLQYLNLGDNDFSGSIPASWGKLQSLKNLILRGNDLSGPVPDTLANISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGSHLERHCVSNSATPASTNKSKVAVVVSFASCGALALLCLGAMFAYRYRYIQRHKNEVFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPARKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLESYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWAQLEEISNQEFSSISHHFAWADESTLQEAIQLSTAR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1593 681 SUPERFAMILY Protein kinase-like (PK-like) 338 633 IPR011009 -
Lele21g1593 681 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 81 644 - -
Lele21g1593 681 SUPERFAMILY L domain-like 100 270 - -
Lele21g1593 681 Gene3D Ribonuclease Inhibitor 96 280 IPR032675 -
Lele21g1593 681 FunFam Somatic embryogenesis receptor kinase 1 329 436 - -
Lele21g1593 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lele21g1593 681 FunFam Somatic embryogenesis receptor-like kinase 1 437 653 - -
Lele21g1593 681 Pfam Protein kinase domain 361 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1593 681 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 97 255 - -
Lele21g1593 681 Pfam Leucine rich repeat N-terminal domain 98 136 IPR013210 -
Lele21g1593 681 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Lele21g1593 681 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Lele21g1593 681 Gene3D Transferase(Phosphotransferase) domain 1 437 653 - -
Lele21g1593 681 ProSiteProfiles Protein kinase domain profile. 360 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1593 681 Gene3D Phosphorylase Kinase; domain 1 329 436 - -
Lele21g1593 681 SMART serkin_6 360 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1593 Lele-ChrLele21 23997557 24001503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1593 81 681 Receptor kinase-like Gene Family AT5G10290 55.629 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele21g1593 Pkinase 9.5e-44 CL0016