Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1592 ATGGCGACGATGGTGTGGTTTCAGTGTGTGTTCGCGGCCATCGCGGTGGTTATACTGGCCGGATCGGTGCTGGCGAGGATGAATTTCAAAGCGTGGATGATGTTTGTGCCGTTGTGGCTGACGTTTTCATACACCGTCGGAGCATTCACCTTGTGGGGCGGTGGGTTCTTGTTTCACTGGGGCGTCATGGACTACTCCGGTGGCTACGTCATCCACCTTTCTTCTGGGATCGCTGGTTTCACCGCCGCTTACTGGGTGGGCCCGAGGTCGAAGAAAGATAGAGAGAGGTTTCCGCCGAACAATGTGTTGCTGACGCTGGCGGGGGCGGGGCTGCTGTGGCTGGGATGGGCGGGCTTCAACGGCGGCGATCCCTACTCGGCCAACACCGACTCATCCATGGCGGTTCTCAACACCAACATATGCGCCGCCACCAGCGTGCTGGTGTGGACGTGGCTTGACGTCATCTTCTTCAAGAAACCATCTGTCATCGGAGCCGTTCAGGGAATGATCACCGGTCTCGTCTGCATCACTCCCGGCGCCGGTCTGGTTCAAGGATGGGCAGCCATAGTGATGGGGATACTATCAGGTAGTGTGCCATGGTGGAGCATGATGATATTAGGCAAGAAACTCAAGATATTCCAAATGGTGGATGACACTCTCGCCGTCTTCCACACTCACGCCGTCGCAGGACTTCTCGGCGGCATCCTCACCGGCCTCTTTGCAGAGCCTCGCCTCAGTGCTCTCTTTCTCCCCGTCACCAACTCCAGAGGAGGCGTGTACGGCGGCTCCGGCGGTGTCCAGATCGGCAAACAAATCGTGGGAGGGCTGTTCATCATAGGATGGAACCTAGTGGTGACATCCATCATATGTGTGGTCATAAGTTTTATAATTCCTCTGAGGATGTCGGAGGAGGAATTGGAGATCGGAGATGACGCCGTTCACGGAGAAGAAGCTTATGCGTTGTGGGGTGATGGAGAGAAGTTGACTTGTGGGGCGGTGGGTTCATATTCGCCAGCACTGATCCGGGCGACAGAAGCGCTGCCAGCTTCTGGGATTGCTGGTTTCACCGCCGTTTACTGGCGGCATTCACTCGGGAGCGGATCACCTACCCTCGCGCATACCACTGCAAGCAAGCCTCCAATGTCCTCAGCGGCAATTGTCAACTACATAAAGGGCTCAGTTGAAAAAGGGCTCAGTTGA 1200 0.5617 MATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFTLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSVLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSVPWWSMMILGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPRLSALFLPVTNSRGGVYGGSGGVQIGKQIVGGLFIIGWNLVVTSIICVVISFIIPLRMSEEELEIGDDAVHGEEAYALWGDGEKLTCGAVGSYSPALIRATEALPASGIAGFTAVYWRHSLGSGSPTLAHTTASKPPMSSAAIVNYIKGSVEKGLS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1592 399 PANTHER AMMONIUM TRANSPORTER MEP2 1 327 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele21g1592 399 Pfam Ammonium Transporter Family 4 319 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele21g1592 399 PRINTS Rhesus blood group protein signature 8 24 IPR002229 GO:0005886
Lele21g1592 399 PRINTS Rhesus blood group protein signature 189 207 IPR002229 GO:0005886
Lele21g1592 399 PRINTS Rhesus blood group protein signature 134 156 IPR002229 GO:0005886
Lele21g1592 399 PRINTS Rhesus blood group protein signature 103 121 IPR002229 GO:0005886
Lele21g1592 399 FunFam Uncharacterized protein 125 322 - -
Lele21g1592 399 Gene3D Ammonium transporter AmtB like domains 1 322 IPR029020 -
Lele21g1592 399 SUPERFAMILY Ammonium transporter 3 301 - -
Lele21g1592 399 ProSitePatterns Ammonium transporters signature. 64 89 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1592 Lele-ChrLele21 23990039 23993134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1592 1 330 Inorganic Solute Cotransporters AT2G38290 71.212 1.19e-166 469