Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1575 ATGGACAAGTACGAGACCGTCAAGGATTTGGGGGCTGGCAACTTTGGGGTCGCCAGGCTCATGAGGAACAAGGAGACCAAGGAACTCGTCGCCATGAAATACATCGAGCGTGGCCACAAGATTGATGAGAATGTGGCAAGGGAAATTATGAACCACAGGTCCCTTCGACATCCCAATATAATCCGCTTCAAAGAGGTGGTCTTGACCCCAACACATTTGGCTATAGTAATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGGATCTGTACTGCTGGCAGGTTCAGTGAAGATGAGGCTAGATATTTCTTTCAACAGCTGATCTCTGGTGTCAATTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGTTGGAAAATACTCTTCTAGATGGAAGCCCTGCACCTCGCTTGAAGATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCACGGCCCAAATCAACTGTTGGAACTCCTGCTTATATAGCCCCTGAAGTCCTTTCCAGGCGCGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTCTTTGTCATGCTGGTTGGAGCATATCCGTTTGAGGACCATGCTGACCCCAGGAATTTCAGGAAAACAATTCAGCGAATAATGGCTGTCCAATACAAAATCCCTGATTATGTCCACATATCTCAAGATTGCAGACACCTCCTTTCTTGTATATTTGTTGCGAATCCATTGAAGAGAATAACTCTAAAGGAAATCAAGAACCACCCGTGGTTTTTAAAGAGCCTTCCAAGGGAGCTAACGGAATCAGCTCAAGCTACCTATTATCAGAGAGACAACCCAAGCTTTCCTGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCTAGAAACCCACCTCCAGTATCTAGACCTATCAAAGGTTTTGGCTGGGAAGGTGAAGAAGATGAAGAAGATGAGGAAGCTGAGGTAAAGCAAGAGGAGGATGAAGAAGATGAATATGACAAAAGGGTCAAGGAGGCTCATGCCAGTGGAGAATTTCAAGTCAGTTAA 1062 0.4529 MDKYETVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIMNHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARYFFQQLISGVNFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLFVMLVGAYPFEDHADPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSCIFVANPLKRITLKEIKNHPWFLKSLPRELTESAQATYYQRDNPSFPVQSVEEIMKIVGEARNPPPVSRPIKGFGWEGEEDEEDEEAEVKQEEDEEDEYDKRVKEAHASGEFQVS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1575 353 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele21g1575 353 Coils Coil 320 347 - -
Lele21g1575 353 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1575 353 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele21g1575 353 SUPERFAMILY Protein kinase-like (PK-like) 2 295 IPR011009 -
Lele21g1575 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele21g1575 353 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele21g1575 353 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele21g1575 353 MobiDBLite consensus disorder prediction 301 353 - -
Lele21g1575 353 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1575 353 PANTHER SERINE/THREONINE KINASE 3 307 - -
Lele21g1575 353 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1575 353 CDD STKc_SnRK2 3 259 - -
Lele21g1575 353 MobiDBLite consensus disorder prediction 315 333 - -
Lele21g1575 353 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1575 Lele-ChrLele21 23886522 23888967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1575 3 262 CBL-interacting serine-threonine protein kinases AT2G26980 41.328 5.20e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele21g1575 Pkinase 1.9e-70 CL0016