Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1567 ATGGCCGCAAGGCTAACCGCCATGGACGACGACGAAGTAGGAAAAGCCACAATGTTTCAATCGAGCATTCATGCTCCCGCTCAAGTTCAGGCTCGCCGGAAGGGCACCGGAGTGAAGGTGTGGCTCGTCGTGTCGGAGACTGGGCAGTCCCACCTCGAGGAGGTTGAAAAGCACTACATCATGAGGCGTACCGGCTTACCGGCTCGTGATCTTCGTGCTCTCGATCCAATTTTGTCGTATCCATCCTCCATTCTTGGACGCGAGAGAGCCATCGTCATCAATTTGGAGCACATTAAAGCTGTAATTACAGCCAAGGAGGTCTTCTTGATCAATTCCTCTAATACATTGTTTGTTCAATTTGTTCAAGATCTTCAGACTCGCGTTTCTACTAATAATGGAGCGCCTCTTCAAATGAGTAAAGAAAATGATAATGAGTTCGCAGCCAATCAACTGCCTCCTTCCCTGCGTAATCGTCATCATTCCCAAAAGAATTTAATCAAAGGAACGTCTGGGAGTATTAAGAGTGCAGATACGTCAAACATTGATGTTCAAGAGGATAGTCATAAGATTTCGGATGTTGAGCCAGTGGCTGCAGCTCCTAAGCAGTTGCCTTTCGAATTTAGAGCACTTGAAGCTTGTCTTGAATCTGCATGCAGGTGCCTTGAATTTGAGACTCAAACACTGGAAGAAGAGGCTTACCCAGCTCTAGATGAATTGACTTCCCAAATTAGCACACTCAATCTTGAACGCGTGAGACAGATCAAGAGTTGTCTAGTTACACTTTCTGGTCGTGTGCAGAAGGTACGAGACGAACTCGAGAACTTGTTAGACGATGACAATGACATGGCTGAAATGTACTTGACGCGAAAGCTTGCTTCTCGCTCCCTATATCAATCATCGCCAAGAGAAGTCTCTTCAGTGGAAGAAGATGACCATAGAGCTGAAGATTCCAATTCAGAAAACACTGACATTTCTACTACTGTTAAGCCCGACGTTGAGGAATTGGAGATTCTCATAGAAGCATATTTTGCAGAGTTAGATGGCATATTGCAAAAACTGTCCGATATGAGTGAGTACGTGGACGACACAGAGGACTGCATCAACATAATGTTGGATGATAAGCAGAATCAGCTGCTGCAGGTATCAGTAAAACTCAATACAGCAAACTTGATACTAGGTGCCGGCATCGCGGTGGTGGGTTTGTTTGGGATGAATATTCATATCAGTTTGTATGATGGAACAAATAGACAATTCTTGGGAATAGCGTGGGGAATAATAGGAAGCTGTCTGGGATTATATGCTATTGCTGTTGGATGGGGTAAGAAAAGATATTTAAACCCGGGGAAGGAAGGCAATGTTAGGCAAGAAGAGGATGGTGAGCGTGAGCTTCCAGTGAAGTCAACAGCAACTGGGGTGTGTTTGGAAAAGTTTGCAGACTTGACAAGCCTTGCGTGGTGGATGAAGTTCACCTCCGCAGATTTGATGGACTTTTGTATCACTGTTAAAGCTCCTGTCCGTGAAGTATGGAATATTCTTGCTGCCTATGAGAGTCTTCCTGAGATCGTTCCAAATTTAGCAATCAGCAGAATTTTATCCCTAGACAACAATAATGTTCGTATTCTTCAGGAGGGGTGTAAGGGTCTGCTTTATATGGTACTTCATGCTCGTGTGGTTCTAGACTTGTGTGAACATCTTGAACAGGAGATCAGTTTTGAACAGGTTGAAGGGGACTTTGATTCATTTCAAGGAAAATGGATTTTTGAGCAACTAGGGAATCATCACACTTTGCTGAAGTACTCTGTGGAGTCAAAAATGCGCAAAGACACATTCCTTTCGGAAGCAATCATGGAGGAGGTTATTTATGAAGATCTCCCATCAAACTTATGTGCAATAAGAGATTACATAGAGAACAAAGAGGCATCCAATTCATCAGAAGAGAGTGACCAGGAAAGCGATTCAGATTCAGCGCATCAAGTTGTTTCATCTGACTTTGAAGAAGAAGATGGATATAGTTCAGCTGAGGAGATTTCTAATGATGATGTTGAAAGTTCATCATATCAACAAAGGCCTAGGGTTCCAGGCTTAGAGAGGGAGATTGAAGTTCAAAAATCTGAAATCTTGAAATTTATTTCAGAATATGGTTATGACATAATTGACACCTCTGATCAGAATGTGCTCCATTTATTTGTACAGATTAGTCGATTTCAAAGGAACTGGGGAATGGATCCTTCATTCATGCCCAGTAGAAAGACATTTGAACGTGCAGGGCGCAATGATATTGCTCGTGCACTAGAAAAGTGGGGTGGTCTGCATGAAGTTTCTCGCGTTCTGTCGCTTAAGATCTGGTGTAATTGTGAGAATGGTAAAGAAATCCACAGGGAATTAGCAATGGCGACCACTGCTTGTTTCATCATTGTTAGCAGAAATGATATTCCTATATACGAATCTGAAGTTGGGACTGCTACTAAAAGAGAAGATGCTGCTCAGCTGCATCAATTTATACTGCATGCTGCTCTTGATATTGTGCAGGACCTTGCATGGACTACTAGTGCTATGTACTTGAAATCAATAGACAGGTTTAATGATCTGGTGGTATCAGTGTATGTCACAGCTGGTCATATCCTCTATATTTGA 2634 0.4286 MAARLTAMDDDEVGKATMFQSSIHAPAQVQARRKGTGVKVWLVVSETGQSHLEEVEKHYIMRRTGLPARDLRALDPILSYPSSILGRERAIVINLEHIKAVITAKEVFLINSSNTLFVQFVQDLQTRVSTNNGAPLQMSKENDNEFAANQLPPSLRNRHHSQKNLIKGTSGSIKSADTSNIDVQEDSHKISDVEPVAAAPKQLPFEFRALEACLESACRCLEFETQTLEEEAYPALDELTSQISTLNLERVRQIKSCLVTLSGRVQKVRDELENLLDDDNDMAEMYLTRKLASRSLYQSSPREVSSVEEDDHRAEDSNSENTDISTTVKPDVEELEILIEAYFAELDGILQKLSDMSEYVDDTEDCINIMLDDKQNQLLQVSVKLNTANLILGAGIAVVGLFGMNIHISLYDGTNRQFLGIAWGIIGSCLGLYAIAVGWGKKRYLNPGKEGNVRQEEDGERELPVKSTATGVCLEKFADLTSLAWWMKFTSADLMDFCITVKAPVREVWNILAAYESLPEIVPNLAISRILSLDNNNVRILQEGCKGLLYMVLHARVVLDLCEHLEQEISFEQVEGDFDSFQGKWIFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLCAIRDYIENKEASNSSEESDQESDSDSAHQVVSSDFEEEDGYSSAEEISNDDVESSSYQQRPRVPGLEREIEVQKSEILKFISEYGYDIIDTSDQNVLHLFVQISRFQRNWGMDPSFMPSRKTFERAGRNDIARALEKWGGLHEVSRVLSLKIWCNCENGKEIHRELAMATTACFIIVSRNDIPIYESEVGTATKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKSIDRFNDLVVSVYVTAGHILYI 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1567 877 Coils Coil 332 352 - -
Lele21g1567 877 Pfam Polyketide cyclase / dehydrase and lipid transport 501 632 IPR005031 -
Lele21g1567 877 MobiDBLite consensus disorder prediction 676 690 - -
Lele21g1567 877 MobiDBLite consensus disorder prediction 304 319 - -
Lele21g1567 877 FunFam Magnesium transporter MRS2-1 29 112 - -
Lele21g1567 877 FunFam Magnesium transporter MRS2-E 156 378 - -
Lele21g1567 877 Gene3D Magnesium transport protein CorA, transmembrane region 117 378 - -
Lele21g1567 877 Gene3D - 498 645 IPR023393 -
Lele21g1567 877 SUPERFAMILY SNARE-like 797 875 IPR011012 -
Lele21g1567 877 Coils Coil 258 278 - -
Lele21g1567 877 MobiDBLite consensus disorder prediction 299 325 - -
Lele21g1567 877 CDD TRAPPC2_sedlin 800 874 - -
Lele21g1567 877 Pfam Sedlin, N-terminal conserved region 805 874 IPR006722 GO:0006888
Lele21g1567 877 MobiDBLite consensus disorder prediction 639 693 - -
Lele21g1567 877 SUPERFAMILY Bet v1-like 499 637 - -
Lele21g1567 877 CDD Mrs2_Mfm1p-like 41 443 IPR039204 -
Lele21g1567 877 MobiDBLite consensus disorder prediction 639 664 - -
Lele21g1567 877 CDD SRPBCC_11 499 636 - -
Lele21g1567 877 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 28 444 IPR039204 -
Lele21g1567 877 Gene3D - 28 113 - -
Lele21g1567 877 Gene3D - 795 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1567 Lele-ChrLele21 23806197 23816996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1567 40 445 MRS2 Gene Family AT3G19640 48.230 1.52e-118 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1567 21 23806197 23816996 Lele21g1567 21 23806197 23816996 ECH
Lele21g1567 21 23806197 23816996 Lele23g0449 23 3233960 3238268 hybridization
Lele21g1567 21 23806197 23816996 Lele24g1511 24 20920167 20929105 hybridization