Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1561 ATGGCACACATTGCTTCAACTGCTTCAGCCACATTTCTGGCTCTCCAGCGCGGGACAAGGCAACAGAGTAAAATTTTTCCGGCCTTTTCGAGCAGTAGGGGAATTCGTTCTTTCTTGTTTACAAATTCTCCTAGGAAACGGTTGCAAGTACGATTGTTTTCTTCTGGGACAAATAGCAGCAATGGAAATATTGTGGAGATATCTGAGAGTGAAAAGAAACTAAGGAACTTCGCTTGGCCTGACACGAGGAGGCCTAGGGTGTGCATACTGGGTGGTGGTTTCGGCGGTTTATATACTGCATTAAGGTTGGAATCACTTGTGTGGTCTGACGACAAAAAGCCACAGGTTCTTCTTGTTGACCAGTGTGAACGTTTTGTTTTCAAGCCCATGTTGTACGAGCTTCTGTCTGGAGAAGTGGATGAATGGGAAATAGCTCCCCGATTCTTAGATTTGCTGGCAAACACTAGCGTCCAGTTTTTGCAAGATAGAGTTAAACTTCTGCATCCCTCTGATAATTGGGGAATGGATGGACCGCCAACATCTAGTTGTGGAGGAACCGTGCATCTTGAAAGTGGCCTTTCTATAGAATATGACTGGTTGGTTCTTGCTTTGGGAGCTGAAAGTAAACTTGATTTCGTACCAGGAGCAACTGAGTTTGCATTGCCATTCTCCACAGTAGAGGATGCAATTTTAGCTGCTACAGTGGCAGAGAGATTAAAGGACAAAGGGGTTGTTAGAGCAATTGATGCTGAAAACTTGATCTGCCCAACTGCCCCACCTGGCAATAGAGAAGCTGCACTGAAAGTTCTTTCATCCAGAAAGGTTGAACTTCTATTGGGCTTTCTAGTCCGGTGCATTCGGGGGGTGAGCTACTTTGAGTCTTCAGATACCCTGACAGGGGAAGGTGAAAACGAGGGAAATCAAGCTCTTGTTGATGATTCTGATAAATATGTTTTGGAGCTGCAACCTACCGAAAGGGGATTACAAAGGATAATTCTAGAAGCAGATCTGGTATTGTGGACTGTTGGTTCTAAATCTTCTCTTACTCAGATAGAACCCTCAAATTTATCATATCCACTTCCTCTTAATGCCCGGGGGCAAGCAGAAACAGATGAAACTCTTCGTGTTAAGGGCCACCCACGGATATTTGCTCTGGGCGACTCCTCTGCAATAAGAGATTCACATGGAAGGATCCTTCCAGCCACTGCTCAGGTTGCTTTTCAGCAAGCGGACTTCGCTGGTTGGAATCTGTGGGCCGCGATCAATGGCCGTCCACTTTTGCCATTTAGGTTTCAGAATCTGGGGGAGATGATGACACTGGGAAGAAATGATGCTGCCATTTCTCCCAGTTTTTTTGAGGGGCTGACCTTAGAAGGTCCCATTGGGCATACAGCAAGGAAACTAGCATATCTGTTGAGGTTACCAACAGATGAACATAGGCTTAAAGTGGGGATCAGCTGGTTCACAAAATCTGCCATTGATTCAGTGGCTTCACTACAGAGCACCTTAACCAAGGTTCTTTCCGGTTCTTAG 1533 0.456 MAHIASTASATFLALQRGTRQQSKIFPAFSSSRGIRSFLFTNSPRKRLQVRLFSSGTNSSNGNIVEISESEKKLRNFAWPDTRRPRVCILGGGFGGLYTALRLESLVWSDDKKPQVLLVDQCERFVFKPMLYELLSGEVDEWEIAPRFLDLLANTSVQFLQDRVKLLHPSDNWGMDGPPTSSCGGTVHLESGLSIEYDWLVLALGAESKLDFVPGATEFALPFSTVEDAILAATVAERLKDKGVVRAIDAENLICPTAPPGNREAALKVLSSRKVELLLGFLVRCIRGVSYFESSDTLTGEGENEGNQALVDDSDKYVLELQPTERGLQRIILEADLVLWTVGSKSSLTQIEPSNLSYPLPLNARGQAETDETLRVKGHPRIFALGDSSAIRDSHGRILPATAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFFEGLTLEGPIGHTARKLAYLLRLPTDEHRLKVGISWFTKSAIDSVASLQSTLTKVLSGS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1561 510 Gene3D - 85 221 IPR036188 -
Lele21g1561 510 Pfam Pyridine nucleotide-disulphide oxidoreductase 234 410 IPR023753 GO:0016491
Lele21g1561 510 PANTHER APOPTOSIS-INDUCING FACTOR 1 231 506 - -
Lele21g1561 510 SUPERFAMILY FAD/NAD(P)-binding domain 86 423 IPR036188 -
Lele21g1561 510 Pfam Pyridine nucleotide-disulphide oxidoreductase 86 228 IPR023753 GO:0016491
Lele21g1561 510 Gene3D - 231 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1561 Lele-ChrLele21 23758949 23763424 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1561 21 23758949 23763424 Lele21g1561 21 23758949 23763424 ECH
Lele21g1561 21 23758949 23763424 Lele23g0455 23 3301061 3305502 hybridization
Lele21g1561 21 23758949 23763424 Lele24g1503 24 20863330 20869394 hybridization