Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1558 ATGTTTCAAGACGCAGGGGAATTACAGCGAGAAGTAGAAGAAGAAGCTGAAGAAAGAGAGAAGAACAGAGGAAGAAGAAGAAGAAGAATGAATGGTGAATTGGAATTACCACCTGGGTTCAGATTCCATCCAACGGACGAGGAGCTGGTGAATCACTATCTCTGTAGGAAATGTGCCTCTCAGTCCATTTCTGTTCCCATTATCAGAGAGATCGATCTCTACAAATTTGATCCATGGCAGCTTCCTGAAATGGCGTTGTACGGCGAGAAAGAATGGTATTTCTTTTCACCGAGGGATAGAAAATACCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGAAGTGGGTATTGGAAAGCAACTGGAGCCGACAAGCCGATTGGTAAGCCGAAGCCACTGGGAATCAAGAAGGCACTCGTATTCTACGCCGGTAAGGCTCCCAATGGAATCAAAACGAATTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCTGCCGGCAAGAAAAAGAACCCAAGGCTTGATGATTGGGTGTTATGTCGAATTTACAACAAGAAAGGCACGATTGAGAAATACAATGTGGTGGATCAGAAAGCGGCGGGCAAGTTATCGGAATTCCATGACCATGAGACGAAACCGGAAATCAAACCGTCCGACCACAATAAGGTGCAGGCGGCGGCGGCGGCAGAACCATCGGCGTTCACAAATGACCAATTCTATATGGACACTTCAGACTCGGTGCCGAGGCTGCACACGGACTCGAGCTGCTCGGAGCATGTGGTTTCGCCGGACGTCACGTGCGACAAGGAGGTACAGAGCGAGGCCAAGTGGAACGAGCTAGGGCTAGGAGAAGAAGTTGATGGGTTCGATTTTGAATTGAATTACCTCTCGGGACAAGATCCTTTTGGCTCTTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTTCTACAGAAGCCATTTTGA 987 0.4873 MFQDAGELQREVEEEAEEREKNRGRRRRRMNGELELPPGFRFHPTDEELVNHYLCRKCASQSISVPIIREIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNPRLDDWVLCRIYNKKGTIEKYNVVDQKAAGKLSEFHDHETKPEIKPSDHNKVQAAAAAEPSAFTNDQFYMDTSDSVPRLHTDSSCSEHVVSPDVTCDKEVQSEAKWNELGLGEEVDGFDFELNYLSGQDPFGSSVQYQMNQLSPLQDMFMFLQKPF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1558 328 MobiDBLite consensus disorder prediction 7 30 - -
Lele21g1558 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 35 245 - -
Lele21g1558 328 MobiDBLite consensus disorder prediction 1 30 - -
Lele21g1558 328 Pfam No apical meristem (NAM) protein 37 160 IPR003441 GO:0003677|GO:0006355
Lele21g1558 328 SUPERFAMILY NAC domain 30 186 IPR036093 GO:0003677|GO:0006355
Lele21g1558 328 Gene3D NAC domain 45 190 IPR036093 GO:0003677|GO:0006355
Lele21g1558 328 Coils Coil 5 25 - -
Lele21g1558 328 ProSiteProfiles NAC domain profile. 36 186 IPR003441 GO:0003677|GO:0006355
Lele21g1558 328 FunFam NAC transcription factor 45 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1558 Lele-ChrLele21 23740314 23741589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1558 30 328 NAC Transcription Factor Family AT1G01720 63.934 1.39e-127 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele21g1558 NAM 1.2e-38 No_clan