Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1544 ATGGAGAGGCAAATGAAGCTGACCGGAGACACTATGGCGTCCGAGGAAGGCACGTGTGACTGCGACGGTGGTCGGACGGTTGTCGTTGGGGTGAAGTTGGATCCTCGGAGCAGGGAATTGCTCACATGGGCCCTCGTAAAAGTGGCGGAGCCCGGTGACCATGTCATTGCGCTTCACGTCATCGGCAGTATGCCTGCGGGTACGGGATCGCTTCTCTCTCTTGTAAATACTTTTGATTCCGTTCTCGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTCAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTCTTGTACGGGAGGCGAAATCGTTTGGTGCATCAACCGTAATCGTGGGGACTTCTAAAACGCATCACACAATCCGGTCTTCGGCATCCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCTGTTGACAATGGCAAAATAGCGTTCCACAGAGAGGCTACAAAAATATGTGGTGATCAAGTAAAACTAAATGAAGGCCCAGCTTTGTTAAGAAAATCCTTCACGCCCTGTACAAAGACAAATCTCAGGAACTGTGAATTTTGTGAGCGGGTGCTAGCACATCCAGAGAGTTCTGCTATTGAAGATGTAACTGATGATCAGGAAAAGAAAGATTCACTAGCTTTAGTACCGCTCCAGAAAATTGGCAATGGTCATAGATGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGTTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCACATGCAGAAATCGTATGTGAGCAATCCATATGTTTTTCAACGGGCAGTTAAACAGACCAGCTGGCATTCATCTGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACAAAAATGGCAGTACTACCCTTGATGGGCAGAGTGGTGCAATTGTGCCATTCAGATCTGCTGCTAACTCTGGCTTGAGTAACTTCCGTGAAGAATTGTCCAGCTTACCGGAGAAGTACTCATCTTCATGCAGGGTGTATAGTTTCCAAGAACTCGCTTCTGCAACTGCTAACTTCTCGCCTGAAAATTTGGTTGGCAAAGGTGGCAGTAGCTATGTTTATAAAGGATGTCTTCCAGATGGCAAGGAGGTGGCTGTGAAAATTTTGAAGCCATCAGAAGACGTGGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCTCAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGACGACAATAATTTGCTTTTGGTTTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTCAGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTATACAGGCTGTGATCCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGACTGGCCAGTTGGGGTTCTTCTTCATCCCATGTTACTTGTATCAATGTGGCTGGAACCTTCGGATACCTGGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATGTATACGCTTTTGGTGTTGTGCTTCTTGAGCTTCTTTCTGGCAGGAAGCCCATCAATAACGAATCCCCTAAGGGCCAGGAGAGCCTTGTAATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCATTAGCGATCCTGAAAATTGGTTGATTGACAGAATGGTTTTGGCTGCTACCCTTTGCCTCAGACGATCACCTAAATGTCGACCTGAAATCAGCATCATATTGAAACTTCTGCATGGTGATGGGGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGCGAACCAGAAGAACTTGACGCATTGGATGGTGGACTGAACAATATTCAGTCGCATCTGAACCTTGCTTTGCTGGACCTGGAAGATGATACAATTTCTGTAAGTAGCTCTGAGCAAAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCATCAAGTTTTGATTAA 2112 0.4465 MERQMKLTGDTMASEEGTCDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVIGSMPAGTGSLLSLVNTFDSVLAVYEGFCNLKQVDLKLKVCRGESARKLLVREAKSFGASTVIVGTSKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGDQVKLNEGPALLRKSFTPCTKTNLRNCEFCERVLAHPESSAIEDVTDDQEKKDSLALVPLQKIGNGHRCATVVQESNQSKHGWSVLRQVFLPKKHMQKSYVSNPYVFQRAVKQTSWHSSAVVHPDLKQINIDKNGSTTLDGQSGAIVPFRSAANSGLSNFREELSSLPEKYSSSCRVYSFQELASATANFSPENLVGKGGSSYVYKGCLPDGKEVAVKILKPSEDVVKEFLLEIEIISTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFSWQERYKVAVGVAEALDFLHNGCIQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTCINVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSGRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSISDPENWLIDRMVLAATLCLRRSPKCRPEISIILKLLHGDGEVTSWAKQEVGEPEELDALDGGLNNIQSHLNLALLDLEDDTISVSSSEQSVSLEDYLQGRWSRSSSFD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1544 703 Gene3D Phosphorylase Kinase; domain 1 325 436 - -
Lele21g1544 703 Gene3D HUPs 24 157 IPR014729 -
Lele21g1544 703 FunFam Putative receptor-like serine/threonine-protein kinase 437 647 - -
Lele21g1544 703 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 148 - -
Lele21g1544 703 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 331 436 - -
Lele21g1544 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lele21g1544 703 Pfam Protein kinase domain 365 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1544 703 SUPERFAMILY Protein kinase-like (PK-like) 342 631 IPR011009 -
Lele21g1544 703 Gene3D Transferase(Phosphotransferase) domain 1 437 647 - -
Lele21g1544 703 Pfam Universal stress protein family 25 149 IPR006016 -
Lele21g1544 703 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 24 157 - -
Lele21g1544 703 ProSiteProfiles Protein kinase domain profile. 362 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1544 703 CDD USP_Like 26 151 - -
Lele21g1544 703 SMART serkin_6 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1544 703 PANTHER OS08G0249100 PROTEIN 77 644 - -
Lele21g1544 703 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1544 Lele-ChrLele21 23598733 23601983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1544 350 702 Trihelix Transcription Factor Family AT1G70460 40.166 1.71e-74 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele21g1544 Pkinase 3.7e-42 CL0016