LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele21g1529	ATGGGATCGGAAAACAAAGCGAGTAGAAGAAAAGATATTGAAGCAATGAAGAATCAAGGGTGTGAGGTTGAAGCGATAGGTATCAACTACAAGATCCGCACACAGAAAACAGAGAACCCTTTCAAAATCTTTAGCAAAGTTCCAAAACAAATCGACCAAGAGAAAGACCAAGAACCAGAAGGAGGAGAAGAAGGAGAAAAACCTGAAAGAGCATGCAGTGGTGGAGTAAGGCATGTCCTCAAGGATGTGAGCTGCCGAGCCAAGCCGCAAGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTGAAGTTGCCCCACAAAGTGGGTCCATCTTGGTGAACCAGAAACCTGTAGATAATGCTCTGTTCAGGAAGACTTCAGGGTATGTTACACAAAACGATATTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATCAACTCTGCTGCAGAGTAAAGTCACTGATTCAGGAGCTAGGACTCAGCCACGTTGCTAATACACGAATTGGAGATAACAGGGCCCGTGGGATATCCGGTGGGGAAAAACGCCGAGTTTCAATTGGACTTGAAGTTATACACGACCCCAAAGTGGTGATTCTGGATGAACCAACTTCTGGGCTTGACAGCACATCCGCTCTGCAGATCATTGAAATGCTAAAGGTCATGGCTGATTCAAGGGGCCGAACTGTAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTCAATTCTATATTGTTGTTAGCCGGTGGCTGTGTTTTACACCATGGAACTGCGGATTTGTTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTAGTTGAATTTGCCATTGAGTCCATTGAATCGATTGAGAAACAGCAAAAGTGCCAGCGATTTCAAGTACAAACGCCTCCACAATTACTAGCAACAATGCACCAAAAGAAAAGCGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTCACTCTGCAGCAGCTCTTTCAACAATCGAAGGTAATTGATGAAGAAACCATCACCGCTGGAATGGATTTCACCTGTGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATCTTCCGTACAAAGGAGCTCTTTGCATGTAGGACGATCCAGATGCTGATTTCAGGACTCGTTTTGGGCTCCATCTTTTGCAATCTCAAGGATGGACTAGACGGTGCTGAAGAAAGGGTAGGTTTATTTGCCTTTATATTATCGTTCTTATTATCAAGCACCGTAGAAGCTCTGCCAATTTTCCTGCAAGAGAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCTAATGGCCTAGTTTACTTGCCATTCCTACTAATCCTAGCCGTTTTATTCACAGCACCCTTATACTGGCTTGTTGGTCTTAACCGGAATTTCACAGCCTTTTTGCACTTCCTGTGGCTGATTTGGTTAGTTCTTTACACAGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTGGGGAACTCATTGATCGCTGGAGTCATCGGGTCATTCTTCTTGTTCTCGGGTTACTTCATATCAAAACAAGAAATTCCAAAATACTGGATTTTCATGCATTATATATCACTGTTTAAGTATCCCTTTGAAGGGCTTCTGATTAACGAGTTCTCCAACTCAGGTAAGTGCTTAGAGTACATGTTTGGGGCGTGTGTGATGACTGAGGAAAATGTGCTTAAAGAAGAAGGGTATGGTGGCCAAAGGAGTAAATGGAAGAATGTTGGGGTCATGGTGTGCTTCATCTTGTTTTACAGGTTGGTTTCCTATATAATTCTTAGATATAGATGCTCGCAGAGAACCTCCTAA	1983	0.4276	MGSENKASRRKDIEAMKNQGCEVEAIGINYKIRTQKTENPFKIFSKVPKQIDQEKDQEPEGGEEGEKPERACSGGVRHVLKDVSCRAKPQEILAIVGPSGAGKSSLLEILAGEVAPQSGSILVNQKPVDNALFRKTSGYVTQNDILFPLLTVEETLMFSAKLRLKLPQDQLCCRVKSLIQELGLSHVANTRIGDNRARGISGGEKRRVSIGLEVIHDPKVVILDEPTSGLDSTSALQIIEMLKVMADSRGRTVILSIHQPGFRIVKLLNSILLLAGGCVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIESIEKQQKCQRFQVQTPPQLLATMHQKKSDVQGESRSGKFTLQQLFQQSKVIDEETITAGMDFTCDFANSRLKETMILSHRFFKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDGLDGAEERVGLFAFILSFLLSSTVEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAVLFTAPLYWLVGLNRNFTAFLHFLWLIWLVLYTANSVVVCFSALVPNFIVGNSLIAGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLINEFSNSGKCLEYMFGACVMTEENVLKEEGYGGQRSKWKNVGVMVCFILFYRLVSYIILRYRCSQRTS	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele21g1529	660	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 28	17	645	-	-
	Lele21g1529	660	MobiDBLite	consensus disorder prediction	48	72	-	-
	Lele21g1529	660	Gene3D	-	69	297	IPR027417	-
	Lele21g1529	660	MobiDBLite	consensus disorder prediction	41	72	-	-
	Lele21g1529	660	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	63	301	IPR003439	GO:0005524
	Lele21g1529	660	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	74	285	IPR027417	-
	Lele21g1529	660	ProSitePatterns	ABC transporters family signature.	200	214	IPR017871	GO:0005524\|GO:0016887
	Lele21g1529	660	Pfam	ABC transporter	80	228	IPR003439	GO:0005524
	Lele21g1529	660	SMART	AAA_5	89	286	IPR003593	-
	Lele21g1529	660	Pfam	ABC-2 type transporter	388	596	IPR013525	GO:0016020\|GO:0140359
	Lele21g1529	660	FunFam	ABC transporter G family member 5	64	325	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele21g1529	Lele-ChrLele21	23498324	23500306	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele21g1529	85	330	Calmodulin-binding Proteins	AT2G36910	25.969	6.24e-13	70.5