Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1515 ATGCAAAAGCTCTACAAAGAAACCCTTACTCAGGCAAATGAAGAAGAGAACATGGGTAGTGGTGAAGAAACCTCTATCGCAAAGGGTGATGATAGCAGAACAGCGAAAGCTATTGGAAAGATTGGCGACGGTGGTGGAGATGGAGGCAGTGAGACTCTCTCATTCTCACGGACGTGCTCGCTATTCGAAAACGAAGAGGCAAAGGAGCATAGATATACGCGGAATGATATGAATCTCTCCTATCTTAATCGCTTCTCTGAGCGTCTCGTTGCTCCTCTTTACTCTACAAGTCCCATCAGGAGCCAAAGGACGAATGATATTGCTATTGAGGGTCGTAATCTGAATTTCTCGTTCCCCACAAGGCAGGTGAAAGCTGTGCCCATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGATGCGGCAAATCTACCCTCTTAAAGATATTAGCTGGTCTCTTAAATCCTACTTCAGGAACAATTTACGTTGAAGGGCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACGGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCCGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACGTTCTTAGATGAAAGTGACCAGGTTGGTGTTATAAAAGCAGTTAGGAACTCTCTGGATACCTCTTCAGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTGTACATGGAGGAGGGGAAAGTTGTGATGGTTGGAGATGCAGAGAGAATAAAATGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATCAATTCTTGA 1017 0.4503 MQKLYKETLTQANEEENMGSGEETSIAKGDDSRTAKAIGKIGDGGGDGGSETLSFSRTCSLFENEEAKEHRYTRNDMNLSYLNRFSERLVAPLYSTSPIRSQRTNDIAIEGRNLNFSFPTRQVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTIYVEGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSSGVTALWVTHRLEELNYADGAVYMEEGKVVMVGDAERIKCFIEARQSDYIKQINS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1515 338 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 109 322 - -
Lele21g1515 338 MobiDBLite consensus disorder prediction 1 51 - -
Lele21g1515 338 SMART AAA_5 138 301 IPR003593 -
Lele21g1515 338 CDD ABC_cobalt_CbiO_domain1 110 311 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele21g1515 338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 322 IPR027417 -
Lele21g1515 338 Pfam ABC transporter 129 261 IPR003439 GO:0005524
Lele21g1515 338 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524|GO:0016887
Lele21g1515 338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 109 334 IPR003439 GO:0005524
Lele21g1515 338 MobiDBLite consensus disorder prediction 1 20 - -
Lele21g1515 338 Gene3D - 104 337 IPR027417 -
Lele21g1515 338 FunFam ABC transporter I family member 10 105 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1515 Lele-ChrLele21 23433513 23437894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1515 109 336 Calmodulin-binding Proteins AT2G36910 29.317 4.52e-19 86.7