Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1511 ATGGCTACGACGAGATTGTTTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTTAGATACTTCCTGAGGAGGAAGGTTATGGGTAAGAAATTCCTGAATAATGTGATAGCAGAAGTAGAAATATACAAATACGCTCCATGGGATCTCCCAGATAAATCTTATCTGAGAACTGGAGATTTGGAATGGTACTTTTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGTGCTACCGAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGGCATGTTCATTACAAGAATCAACTTGTGGGAATGATAAAAACCCTGATATTTCACACTGGTAGAGCTCCTAAAGGAGATAGAACTGATTGGGTTATGCATGAATTTAGGCTCGAAGATCAGGATCTGATTGATAAAGCCATTCCTCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAAGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAGGCCATTCAATGATGAAGATTGGAATGACGACGATAAAATTGATGGTGTAGGATCTCTCCCATTAGTTGGCGTGCATGCACCAATTACCATTCATCCTAATACACCTGGCAGTTCTATGGCAACTTATAGTCATCCCCCTGCAAGTACATGTGTTGGATCACCACCAGGCTCATGTCTTATGCATCCTTCGGTTCCAAGTGATAAAGTTATATCCACTAATGGGTCTCAAGTTCCAGTTGTTGATGATGTTGGTGCATTGTTGAATTGTTTCATAGCGAATGACACAGTGGCTATGGCTGAAAATAACACTGAGAAGAATGATAATTCTGCTGTGGGGAAGGAAGCTGAAGGCGAACCTTGGTTGGATGGGAATGATATATTTAAGGACCTGGCGGACCTTGACAATACAAATGCAAACCAAATGTATCATGCTAATAATATATTTAAGGATTTGGGAGACCTTGACAACAATTCAAACCAAATCCAAGCTGCAGGTAACATGCCCTTGATGTTCGATGATGATTTGGATTTCTTGGAGTTGCGTGACCTGGACACCATGGTCCCCCACCAGCCTGAACCAGAAAGTGGGGCCCATTTCATCCAGAAAAAGGAGGGTAAGGGTATGTGA 1134 0.4259 MATTRLFPGFRFHPTDVELLRYFLRRKVMGKKFLNNVIAEVEIYKYAPWDLPDKSYLRTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRHVHYKNQLVGMIKTLIFHTGRAPKGDRTDWVMHEFRLEDQDLIDKAIPQDSYVLCKVFQKDGPGPRNGAQYGRPFNDEDWNDDDKIDGVGSLPLVGVHAPITIHPNTPGSSMATYSHPPASTCVGSPPGSCLMHPSVPSDKVISTNGSQVPVVDDVGALLNCFIANDTVAMAENNTEKNDNSAVGKEAEGEPWLDGNDIFKDLADLDNTNANQMYHANNIFKDLGDLDNNSNQIQAAGNMPLMFDDDLDFLELRDLDTMVPHQPEPESGAHFIQKKEGKGM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1511 377 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Lele21g1511 377 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lele21g1511 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 267 - -
Lele21g1511 377 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lele21g1511 377 MobiDBLite consensus disorder prediction 356 377 - -
Lele21g1511 377 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Lele21g1511 377 FunFam Nac domain-containing protein 86 15 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1511 Lele-ChrLele21 23373042 23375602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1511 1 310 NAC Transcription Factor Family AT5G64060 44.444 6.93e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele21g1511 NAM 4.5e-34 No_clan