Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele21g1503 | ATGAACTTTCTTTGTTTTTCTGGTCAAAACCTCAGACCTGAGACTTATGCTAGGCTGGGTCAGCCCAGTCCGGCCCTTGCACAGACCTGGGAAGTGGTGGCGGTGTCATCTCTTCTAGGACAGACCTCTTCCATTATAACTGTTGGACCTTGCAACAACGAATTCTGCAAAATGTTTGGTGTGCGTGCTTCTACGGGGATTGTTTCTGACGTTGTTTACCAGCTTCGTCAAACTTTATCACTTCATGGTGTACGAGCACAATATATAAACATTGGAGGTGGTGTTGGAGGGGAGATCCCTGACAACAAGCGCCTTCAGTATGCCCTGCAGCACATACATGGAATTGGCCGTTCCAAAGCTCACCATATTGTCTGTGAGCTTGGGGTTGAGAACAAATATGTCAAGGACCTAAGTAAGAGAGAATTATATTCCCTTCGAGAACTACTTTCCAAGTACTTGCTCGGAAATGACTTGAAAAGATGTGTTGAGAAAGATATAGAAAGGTTGGTGAGTATTCAGTGTTACAGGGGTTTCAGACATGTGGATGGGTTACCCTGCAGAGGACAACGCACACATACAAATGCTCGTACCAGGAAGAGCAGGCCAGGTTTTGCTGCATCAAGATCTGCTCCCTAG | 636 | 0.4607 | MNFLCFSGQNLRPETYARLGQPSPALAQTWEVVAVSSLLGQTSSIITVGPCNNEFCKMFGVRASTGIVSDVVYQLRQTLSLHGVRAQYINIGGGVGGEIPDNKRLQYALQHIHGIGRSKAHHIVCELGVENKYVKDLSKRELYSLRELLSKYLLGNDLKRCVEKDIERLVSIQCYRGFRHVDGLPCRGQRTHTNARTRKSRPGFAASRSAP | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele21g1503 | 211 | Gene3D | 30s ribosomal protein s13, domain 2 | 160 | 199 | IPR027437 | - | |
Lele21g1503 | 211 | FunFam | 30S ribosomal protein S13 | 95 | 160 | - | - | |
Lele21g1503 | 211 | MobiDBLite | consensus disorder prediction | 187 | 211 | - | - | |
Lele21g1503 | 211 | FunFam | Ribosomal protein S13 | 160 | 199 | - | - | |
Lele21g1503 | 211 | ProSiteProfiles | Ribosomal protein S13 family profile. | 95 | 200 | IPR001892 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Lele21g1503 | 211 | ProSitePatterns | Ribosomal protein S13 signature. | 176 | 189 | IPR018269 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Lele21g1503 | 211 | Pfam | Ribosomal protein S13/S18 | 96 | 197 | IPR001892 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Lele21g1503 | 211 | Hamap | 30S ribosomal protein S13 [rpsM]. | 88 | 207 | IPR001892 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Lele21g1503 | 211 | Gene3D | - | 95 | 159 | - | - | |
Lele21g1503 | 211 | SUPERFAMILY | S13-like H2TH domain | 96 | 200 | IPR010979 | GO:0003676 | |
Lele21g1503 | 211 | PANTHER | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 | 61 | 199 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele21g1503 | Lele-ChrLele21 | 23314901 | 23317230 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele21g1503 | 103 | 200 | Cytoplasmic Ribosomal Protein Gene Family | AT4G09800 | 30.328 | 9.15e-07 | 45.4 |