Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1491 ATGAGTGTGTCGAGGACAAGAAGCTCAGAGAAGTGTATTGGGCATGCAAAGCCTCCTGATCCTGATATTCTTGAAATTGATCCAACTTGTCGCTACTTTAGGATTTCTCATTACACTTCAACTAAACTGAAGCTGCTTTTTGCATACATGACAGTATACAGATGTGATCGGCAAAGTTATAAGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGATTTTGATAGGTTTAAAATACCTCCATAGTCACAACCCACCAATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGCGATCTGGGGCTCTCAACTTTCTTGAAACGGCCTAATGCTGAGAGTGAAACTGCCTTTGGAGATCGTATTATTCTGTCAGAAGGTCCTGCTACTCAACATAATGGATCAAATTCTTTGGATCTTGATGAGACTTGTGAATTACCTATGATCTCTATATATGATAGTTCTGGTGATGCCCCACATTCTCCATGTGTTGAGATACGAAGGCCAAAAAGAGAGATATTGCTCATTTGGCTTTGCGAAGTTGTAAAAGAACTATTGGTGGACAAAAAGATTTGGAATCTGCAAAACAAAAACAACCCTGTGAAGATTCCATGCATAATATTACTAAAGAGAAAGGCATCTTGCACCCGATTGAAAGCTCAAGTGTATTAG 711 0.3896 MSVSRTRSSEKCIGHAKPPDPDILEIDPTCRYFRISHYTSTKLKLLFAYMTVYRCDRQSYKAFDEVSGLEVAWNQILIGLKYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLSTFLKRPNAESETAFGDRIILSEGPATQHNGSNSLDLDETCELPMISIYDSSGDAPHSPCVEIRRPKREILLIWLCEVVKELLVDKKIWNLQNKNNPVKIPCIILLKRKASCTRLKAQVY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1491 236 Pfam Protein kinase domain 62 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1491 236 SUPERFAMILY Protein kinase-like (PK-like) 73 126 IPR011009 -
Lele21g1491 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Lele21g1491 236 Gene3D Transferase(Phosphotransferase) domain 1 26 147 - -
Lele21g1491 236 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 75 127 - -
Lele21g1491 236 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1491 Lele-ChrLele21 23206455 23208944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1491 17 78 MAP Kinase Kinase Kinase AT3G18750 48.387 4.53e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele21g1491 Pkinase 1.7e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1491 21 23206455 23208944 Lele23g0521 23 3854578 3857186 hybridization
Lele21g1491 21 23206455 23208944 Lele24g1431 24 20264190 20268014 hybridization