Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1487 ATGGCTTCAATGAACTCCGCTGTTCTTGCTTCTACCTACGCCATTTCTGGTGCGGCTTCTTCTGAATTCAACACCAAGCACACTTCCATCGCGGTTTCTGCTCCCAAATTGCCCCTCATCAAGGCACAGCAGGCCTCCTCGTCGGCCGCTCCACAAGGAAGAAGAGTTGCTATCTCTCTCTTAGCCGCTACCGTCTTCACCGCCGCTGCCGCTTCTTCTGCCAACGCCGGCGTCATTGAGGAATACCTGGAGAAAAGCAAGGCCAACAAGGAATTGAATGATAAGAAGAGGTTAGCGACGAGTGGTGCGAATCTTGCTAGGGCTTACACCGTGGAATTTGGGACCTGCAAGTTCCCTGAGAACTTCACTGGATGCCAAGATCTTGCGAAGCAAAAGAAAGTGCCATTCATTAGTGATGATTTGGAGCTGGAATGCGAGGGAAAGGACAAATACAAGTGTGGATCTAATGTTTTCTGGAAATGGTGA 486 0.5 MASMNSAVLASTYAISGAASSEFNTKHTSIAVSAPKLPLIKAQQASSSAAPQGRRVAISLLAATVFTAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANLARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1487 161 FunFam Photosystem I reaction center subunit N 77 161 - -
Lele21g1487 161 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 41 161 IPR008796 GO:0009522|GO:0015979
Lele21g1487 161 Gene3D - 77 161 IPR044907 -
Lele21g1487 161 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 161 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1487 Lele-ChrLele21 23178701 23179381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1487 1 132 Calmodulin-binding Proteins AT5G64040 61.268 5.66e-53 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1487 21 23178701 23179381 Lele23g0526 23 3881120 3881802 hybridization
Lele21g1487 21 23178701 23179381 Lele24g1425 24 20231643 20232326 hybridization