Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1429 ATGAATTCTCCAACCACTCAGTTTGTTTCCTCAAGAAGGATGGGTGTTTATGATCCAATTCAACAGATTAATATGTGGGGAGAAAATTTCAAAAGTAATGGTAATTTAAGTGCCTTAATTGGTGAAGCAGATGGGAAGTTAATTAATCAGCCAGAGGATGCTTCTCATAACACATTGGGTACGTCCAAGATGTATGGCCAAGAAGCTAATAAACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGTCGTCAGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGATAGAGCAAGAACTCAACCATGCAAGACAACAGGGTTTATATATGGGCGGGGCATTGGATTCTAATAATCTGGGTTTTCCTGAAACTGTTAATTCAGGCATTACGACCTTCGAGATGGAGTATGGCCACTGGGTTGAAGAGCAAAATAGACAAATCTGTGAACTAAGAGGTGCTTTAAATGCTCATATTAGTGACATGGAGCTCAGGATACTTGTAGATAGTATAATGAATCACTATTTCGAACTCTATCGAAAGAAGTCCGCTGCTGTAAAAGCAGATGTTTTCTATGTGATGTTTGGTATGTGGAAAACTACAGCTGAGCGGTTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTTCTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACAGAGCAACAACGTTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTCCAGCAAACACTTGGCGATACGATAGCAGCTGGACCACTAGTTGAAGGAACTTATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTCGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACATTGCAGCAAATGTTTCGGATCCTAACGATCCGTCAGGCTGCTCGATACTTGCTTACTCTAGGCGAGTATTTCCAACGCCTACGATCCTTGGGCTCGCTTTTGGCGAATCGTCCTCGGGAACCAGCTTAG 1080 0.4306 MNSPTTQFVSSRRMGVYDPIQQINMWGENFKSNGNLSALIGEADGKLINQPEDASHNTLGTSKMYGQEANKPTDKIQRRLAQNREAARKSRQRKKAYVQQLESSRLKLIQIEQELNHARQQGLYMGGALDSNNLGFPETVNSGITTFEMEYGHWVEEQNRQICELRGALNAHISDMELRILVDSIMNHYFELYRKKSAAVKADVFYVMFGMWKTTAERFFMWIGGFRPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTIAAGPLVEGTYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRSLGSLLANRPREPA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1429 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Lele21g1429 359 SUPERFAMILY Leucine zipper domain 75 117 IPR046347 GO:0003700|GO:0006355
Lele21g1429 359 ProSiteProfiles DOG1 domain profile. 144 354 IPR025422 GO:0006351|GO:0043565
Lele21g1429 359 MobiDBLite consensus disorder prediction 53 74 - -
Lele21g1429 359 SMART brlzneu 71 131 IPR004827 GO:0003700|GO:0006355
Lele21g1429 359 Coils Coil 250 270 - -
Lele21g1429 359 Coils Coil 94 121 - -
Lele21g1429 359 Pfam Seed dormancy control 161 236 IPR025422 GO:0006351|GO:0043565
Lele21g1429 359 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
Lele21g1429 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 115 IPR004827 GO:0003700|GO:0006355
Lele21g1429 359 MobiDBLite consensus disorder prediction 53 68 - -
Lele21g1429 359 Gene3D - 74 123 - -
Lele21g1429 359 FunFam BZIP family transcription factor 74 123 - -
Lele21g1429 359 Pfam bZIP transcription factor 73 103 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1429 Lele-ChrLele21 22755560 22759468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1429 1 359 Calmodulin-binding Proteins AT5G65210 66.576 2.60e-180 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele21g1429 DOG1 7.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1429 21 22755560 22759468 Lele21g1429 21 22755560 22759468 ECH
Lele21g1429 21 22755560 22759468 Lele22g1420 22 19998679 20003334 ECH
Lele21g1429 21 22755560 22759468 Lele23g0585 23 4377367 4381201 hybridization
Lele21g1429 21 22755560 22759468 Lele24g1372 24 19771876 19776543 hybridization