Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1425 ATGGAAGCAACCTCGAGGCCTCCCTCACAGAAAGAGGCTTTGACTTCATCTTTGATAAGATATCATATTTCATGTAGGAATTCCTTACAAGAATCCATGATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCGTAGTTCTGTTGGCTCTGCTTCTAATACAACTCATGCTCCTTATAAAGAAGCTTAGATCGGATGCACGCCCAGTTACAACCTCACAATATCTCAAACTCATCGAACAGAAGAACCCTACAATTTGTTTCACCAAGAGATTGAGGCTAGAAGGTGCAGAGTGCAGGGTGTGCTTATCTGAATTCCAGGAAGGGGAAAAGGTGAGGAACTTGAAATGTAAACACGCATTTCACAGAGATTGCTTGGACAAGTGGTTGCAGCAATATTGGGCTACCTGCCCTCTTTGCAGGAACCAAGTCCTGCCAGATGATGTTGTGGCCAAGTATCGTGAGCTTCAGAATCAGGTAGAATCTGATGGGAATGATGATCAGATTATGTTCTTGTTATCCGCAGGGACTACGTCTTCTCCTTTTGGGATCTCGCTGAATAATTTGGATGTATCCTCTGCTGTATCTATTGAAGGAGACGAACATGGGGGATATTTCGTGAAAAAGGTGACAGACATTTACAAGTTAGGGTCTGCTTTGTTGACTTTTTTTGGCTGTCAATACTGCATTTTTGAGCTGCTGTTATCAGAATGA 720 0.4319 MEATSRPPSQKEALTSSLIRYHISCRNSLQESMMALSEIFSQLCTKAVVLLALLLIQLMLLIKKLRSDARPVTTSQYLKLIEQKNPTICFTKRLRLEGAECRVCLSEFQEGEKVRNLKCKHAFHRDCLDKWLQQYWATCPLCRNQVLPDDVVAKYRELQNQVESDGNDDQIMFLLSAGTTSSPFGISLNNLDVSSAVSIEGDEHGGYFVKKVTDIYKLGSALLTFFGCQYCIFELLLSE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1425 239 SMART ring_2 101 142 IPR001841 -
Lele21g1425 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
Lele21g1425 239 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Lele21g1425 239 SUPERFAMILY RING/U-box 82 149 - -
Lele21g1425 239 Pfam Ring finger domain 100 143 IPR001841 -
Lele21g1425 239 PANTHER - 33 178 - -
Lele21g1425 239 CDD mRING-H2-C3H2C2D_ZSWM2 100 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1425 Lele-ChrLele21 22715219 22718997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1425 99 154 C3H Transcription Factor Family AT1G15100 53.571 2.00e-18 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1425 21 22715219 22718997 Lele21g1425 21 22715219 22718997 ECH
Lele21g1425 21 22715219 22718997 Lele24g1369 24 19731162 19732356 hybridization