Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1419 ATGGCTACCACTGGGAAAACGCCCAAAGTTTTCTTTCGGCTGCTCACTGAGACTCTGGTGGGCCCTCATGAAAATGAAAGAAAATGCATTATAGCGCTTCCTCATTTCTCTGTCTCTGAAGGGGAACTGAATATGACGACTACACTTGCTTGGAGGTTTGGTTCCAGTAATGGCGGCGGCCTTGCTGCCAATGATATGGAAAGAAATGGTGAGGGGAACATTCCAGATTCAGGGCTCCCAACTCCACATTCTGTTTTGAAGATGGGATTGAGAGATCGCAGCAGCATGGAGGATCCAGATGGGACAGTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGACAGAGCTCATCCTCTGCACAAGAGAAGGAGTACTCCTTGAGGCAGTTATTGGAGCTTATTGATATGCGCAAAAATGCGTTTAGTGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCACTTCTCCGATCCGGTTCATTGAGTGTGAAGATTCAGGCGGCGACTGTTTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTAAAATCCAGTTCAGCCGAAGGTCAAGTTGCTGCCGCAAAGACTATTTACGCTGTCTCTCAAGGCGGCTCAAAAGACCATGTTGGATCAAAAATATTTTCAACTGAAGGAGTAGTTCCTGCGCTGTGGGAGCAGCTTCAGAAGGGGCTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCCTTGAAAAATCTGTCCGGTAATACTGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAATGAAGTTATTGGCAACAGGGCATCCTAGCACTTCAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACTTTAGAGGCGACAAAACAACTCCTGAAATTATTGGGCCCCGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGTGCTCTGAAATCCTTGTCTTCACAGTGCAAAGAAGCAAGGCGTGAGATATCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCAAAAGAGTTCATGCGGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCTATGTGTGCTCTAGCTAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAACTACTCAAATTGCGGATACATTGGGGGCTTTGGCTTCCGCTCTTATGATATATGATAACAAGGCCGAAGCTACTAGGACGTCAGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAATTGAAATCTCAATCGCAGTTTCTTGTGAAGGAAAGAACAATTGAAGCCCTGGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTTGCAAATCCAGATGCAAAACATTTGCTAGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGAGGACCTTATAAGAGCCCTCCTTACATTGTGCAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTCTCATCAGAACAACAGCAAGAATGTGCAGTTGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCATTAGTTCAAATTTTGGAGACAGGATCGACAAGAGCAAAGGAAGACTCGGCAAAAATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGTGCTTGTGTGGAGAGTGCTAACGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGGAGCTCAAATGGGAAGGAGATAGCGGCGAAAACCTTAAATCACTTAATTCATAAGTCTGATACTACCACAATCAGTCAGCTTACAGCATTATTGACAAGTGATCTACCCGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTTGCCCCTCTTAGCGACATTCAACGAGAAGGTAGTGCTGCGAGTGATGCAATTGATACAATGATAAAATTAATGAGCTCTGCCAAAGAAGAAACTCAGGCTAAGTCAGCATCAGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGGGAAAGCAGCGTCGCTGTAAAATCCCTTTTGTCTGCCATGAAGTTGCTTGATACTGAATCTGAAAGTATCCTAATAGAGTCTTCACGCTGCCTTGCGGCAATATTTCTTTCGATTAAAGAGAACAAAGAGGTAGCTGCTGTTGCGAGAGATGCATTACTCCCCTTAGTTGCAATTGCAAATTCTTCTACTTTGGAAGTTGCAGAGTTGGCAACATGTGCGGTGGCTAATCTTATTTTCGATAGTGAGATTTCAGAGAAAGCTGTTGCTGAAGAAGTTATCATGCCTGCTACCAGGGTATTACGGGAAGGCACAGTTTCTGGAAAAACCCATGCAGCAGCGGCAATTGCTCGGCTCATACATTCTCGACAAGTTGATTATTCTATAACTGAATGTGTTAATCGTGCTGGGACTGTGCTTGCTTTAGTTTCCTTCTTGGATTATTCTATTAATGGATCTGTTTCCACATCTGAGGCTATAGAAGCACTTGCTGTTCTGTCCAGGCTGGAACAGAACAGTACACATATTAAACCAGCATGGGCTGTGTTGGCTGAATTCCCTGAAAGCATAAACCCAATAGTGCTGTCTATTGCTGATTCAACACCAATGTTTCAGGATAAAGTTATAGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTTGGAAACAATGTTGTTGCGGCCGTAGGATGCTTGTGTTCATTGGTTAAAAGGGTAATTGGTACCAAAAATGTAAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGTGCTGCCAAAGTAAACCACCATAGACTGGTGGAGGAACTCAACCAAGCAAACTTGTCTGTTGATCTTGTTCAATCTCTTGTTAGTATTCTTTCTTCTGCGTTGCCTTTGTCAAACCAGGGTGAAGAAAACAAGAAATTTATTAGCGTTATCATACAAAGAAAAGAAGAGGTCAATGGTGGTAAATTCAACACAGGCACTGCCATTGTATCTGATGCCAACTTAGCTATATGGTTATTGTCTATTCTTGCTTGTCATGATGAAAAATGTAAAATTGCAATAATGGAGGCTGGAGCAATTGACATTCTCACTGAAAAAATCTCAGACTGTTACTCTCAATATAACCAGATTGATTATAAAGAAGATAGTAGCATGTGGATTTGTGCATTGTTGTTGGCTGTATTATTTCAAGATAGAGATATCATCAGAGCACATGCTACCATGAAATCTGTACCTGCTGTTGCCAGTTTAATGAAGTCAGAAGAATTAGCTAACAGATATTTTGCAGCACAGTCAATAGCTAGCCTAGTCTGTAATGGAAGCAGGGGGACACTACTGTCTGTTGCGAACTCAGGGGCTGCAAGTGGGCTAATCTCCTTACTTGGCTGTGCTGATATTGACATACAAGACCTTCTGGACTTGTCAGAGGAGTTCTCCTTGGTCCGTTATCCTGATCAAGTTGCTCTTGAGAGGCTGTTCAGAGTTGATGACATCAGGGTTGGTGCCACTTCGCGGAAGGCAATACCGGCACTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCCTTTTTAGCTCTTGGACTTCTAACACAGCTCGCCAGAGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCCTGGAGGCACTTACAAAGTATCTTTCACTGGGTCCCCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTTTTTGATAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTGTTACGTTTAGGGGGAAGAGGTGCAAGGTACAGTGCTGCCAGAGCCCTTGAAAATTTGTTCTCTACTGACCAGATTAGGAATGCAGAGACTGCCCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACTGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTAAGCGAAAATCCGTCGAGAGCACTAGCTGTTGCTGATGTTGAAATGAATGCGGTAGATGTGCTTTGCAGGATCCTTTCATCAAATTGTTCATTGGACCTCAAAGGTGATGCTGCTGAATTATGTTGTGTTCTGTTTGGAAATACACGAATTAGGTCCTCCGTGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTTTAGCCCTGCCCAGCATTCAGTTGTGCGCGCACTGGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCCATTATTCCTCTTGTTGGTCTTCTCTACGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAAGACAGACCTGCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTGGACATTCTTCATGAAGCACCTGATTATCTGTGTGCGGCATTTGCAGAATTGCTGCGTATCTTGACCAATAATGCCAGCATAGCTAAGGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTTGGGCCTGATGGACAGCACAGTGCGTTGCAGGTTTTGGTTAATATATTGGAACATCCACAATGTCGTGCTGACCATAGATTGACATCGCAGCAAGCTATTGAACCACTTATCCCCTTGCTCGATTCTCCAATACCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTCCTTTTGGAAGAACACCTTCAGAAGGATCCAACTACACAGCAGGTAATTGGTCCTCTTATTCGAGTTCTTGGTTCAGGTATCCACATATTGCAGCAGAGAGCTGTGAAGACCCTGGTTAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAACTTTCGAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTGCCTATTGCCGTGTTGGTAAGATTGCTTCGTGCTGGCTCAGAGAGCACAGTTATTGGCGCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGCGGTGCCATAGAGGCTCTCTTAGAGCTTCTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTAAACAACGTCAAGATTAGAGATTCGAAAGCTACCAGATCAGCCATAGTACCGTTATCCCAGTACCTCTTGGATCCACAAACCCAAGGACAGCAGGCAAGATTACTAGCAACTTTGGCTCTTGGCGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGCGATGCAGTTTCAGCATGTCGTGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAGAACCTTGTGATGCATAGCCGGTCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGACACATCAGTTCAGGCTGCAATCTTCGTTAAACTTCTCTTCTCTAATCATACAATACAAGAATATGCTTCAAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAATGTGAATGATGAATATCTGAGAGCCCTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAACAACACTTAGCATTCCCCATCTGGTTACATCAATAAAGACGGGTTCCGAGGCCATTCAAGAAGCTGCCTTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTCTCAAGATCTCAGTCAATAGCGGCAGCAGATGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCCTATTGCAGTGTTTGCCCGGCACATTAGTTGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTATCTAGATCCAAATAATGCGCTAGGATTTGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTAATGCTGGGATCTGTCTCTGGAGAATACACTCTACTGCCGCAAACGGAATTAGCTGTTCAACTTCGAGCTTCCACTCATCGTCGTTGTCGGTGTACATGCATCACAGCGCTTTCTCATTTCTCTGCCTCTGAAGGAGGCTTTGATGTTCTATCTGTCTCTCCAGTCAAGATCTGGAGAGGATCAGCGTGCTGA 6663 0.4438 MATTGKTPKVFFRLLTETLVGPHENERKCIIALPHFSVSEGELNMTTTLAWRFGSSNGGGLAANDMERNGEGNIPDSGLPTPHSVLKMGLRDRSSMEDPDGTVASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRKNAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPALWEQLQKGLKTGNVVDGLLTGALKNLSGNTEGFWNATIQAGGVDILMKLLATGHPSTSANVCFLLASMMMEDASVCSKVLTLEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREISNSNGIPALINATIAPSKEFMRGEHAQALQENAMCALANISGGLSYVISSLGQSLESCTSTTQIADTLGALASALMIYDNKAEATRTSDPLVVEQTLLKQLKSQSQFLVKERTIEALASLYGNPVLSIKLANPDAKHLLVGLITMAVNEVQEDLIRALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTRAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSAASDAIDTMIKLMSSAKEETQAKSASALAGIFEMRKDVRESSVAVKSLLSAMKLLDTESESILIESSRCLAAIFLSIKENKEVAAVARDALLPLVAIANSSTLEVAELATCAVANLIFDSEISEKAVAEEVIMPATRVLREGTVSGKTHAAAAIARLIHSRQVDYSITECVNRAGTVLALVSFLDYSINGSVSTSEAIEALAVLSRLEQNSTHIKPAWAVLAEFPESINPIVLSIADSTPMFQDKVIEILSQLCRDQPVVLGNNVVAAVGCLCSLVKRVIGTKNVKVKIGGAALLICAAKVNHHRLVEELNQANLSVDLVQSLVSILSSALPLSNQGEENKKFISVIIQRKEEVNGGKFNTGTAIVSDANLAIWLLSILACHDEKCKIAIMEAGAIDILTEKISDCYSQYNQIDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSVPAVASLMKSEELANRYFAAQSIASLVCNGSRGTLLSVANSGAASGLISLLGCADIDIQDLLDLSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSTDQIRNAETARQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSVAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADHRLTSQQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPTTQQVIGPLIRVLGSGIHILQQRAVKTLVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRDSKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAIFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPTTLSIPHLVTSIKTGSEAIQEAALDALFLLRQAWSACPAEVSRSQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYYLDPNNALGFVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVSGEYTLLPQTELAVQLRASTHRRCRCTCITALSHFSASEGGFDVLSVSPVKIWRGSAC 2220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1419 2220 Coils Coil 340 360 - -
Lele21g1419 2220 SUPERFAMILY ARM repeat 657 972 IPR016024 -
Lele21g1419 2220 Pfam Armadillo/beta-catenin-like repeat 147 177 IPR000225 GO:0005515
Lele21g1419 2220 Pfam Armadillo/beta-catenin-like repeat 568 607 IPR000225 GO:0005515
Lele21g1419 2220 Gene3D - 690 910 IPR011989 -
Lele21g1419 2220 Gene3D - 1425 1660 IPR011989 -
Lele21g1419 2220 ProSiteProfiles C2 domain profile. 2053 2166 IPR000008 -
Lele21g1419 2220 Pfam C2 domain 2105 2163 IPR000008 -
Lele21g1419 2220 Gene3D - 1661 2073 IPR011989 -
Lele21g1419 2220 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2068 2171 IPR035892 -
Lele21g1419 2220 Gene3D - 1219 1423 IPR011989 -
Lele21g1419 2220 SUPERFAMILY ARM repeat 1236 1438 IPR016024 -
Lele21g1419 2220 SMART arm_5 311 352 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 860 902 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1226 1269 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 610 650 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 776 814 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 137 178 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1611 1649 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 179 219 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1481 1521 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 354 403 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1440 1480 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1271 1312 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1899 1939 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1353 1394 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 568 608 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1772 1811 IPR000225 GO:0005515
Lele21g1419 2220 SMART arm_5 1523 1563 IPR000225 GO:0005515
Lele21g1419 2220 SUPERFAMILY ARM repeat 920 1201 IPR016024 -
Lele21g1419 2220 SUPERFAMILY ARM repeat 1445 1714 IPR016024 -
Lele21g1419 2220 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1867 1910 IPR000225 GO:0005515
Lele21g1419 2220 SUPERFAMILY ARM repeat 97 686 IPR016024 -
Lele21g1419 2220 Gene3D - 452 689 IPR011989 -
Lele21g1419 2220 Gene3D - 93 451 IPR011989 -
Lele21g1419 2220 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1238 1282 IPR000225 GO:0005515
Lele21g1419 2220 Gene3D - 913 1210 IPR011989 -
Lele21g1419 2220 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1422 1656 - -
Lele21g1419 2220 Gene3D C2 domain 2104 2183 IPR035892 -
Lele21g1419 2220 SUPERFAMILY ARM repeat 1622 2069 IPR016024 -
Lele21g1419 2220 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 579 621 IPR000225 GO:0005515
Lele21g1419 2220 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 77 2173 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1419 Lele-ChrLele21 22657630 22672442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1419 500 677 U-box Gene Family AT3G46510 30.978 3.06e-08 57.0