Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1418 ATGGCGGCTACTCTTGCTTGGAGGCTTGGTTCCAATAATGGCGGCAGCCTTGCTTCTAACGATATGGAAAGAAATGGCGAGGGGAACATTCCAGATTCAGAGCCCCCAACTCCGCACTCTGTTTTGAAGATGGGATTGAGAGATCGCAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTAGCCCAATGCATTGAGCAGCTGCGACAGAGCTCATCCTCTGCACAAGAGAAGGAGTACTCCTTGAGGCAGTTATTGGAGCTTATTGATATGCGGGAAAATGTGTTTAGTGCTGTTGGATCGCATTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCCGGTTCATTGAGTGTGAAGATTCAGGCGGTGACTGTTTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTAAAATCCAGTTCAGCTGAAGGTCAAGTTGCTGCCGCAAAGACTATTTACGCTGTCTCTCAAGGCGGCTCAAAAGACCATGTTGGATCAAAAATATTTTCAACTGAAGGAGTAGTACCTGCGCTGTGGGAGCAGCTTCAGAAGGGGCTGAAGACTGGAAATGTAGTTGGTGGTTTATTGACCGGAGCCTTGAAAAATCTGTCCAGTAATACTGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAATGAAGTTATTGACAACAGGGCATCCTAGCACTTCAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGATGGAGGATGCATCTGTTTGTTCAAATGTGTTATCTTCAGAGGCGACAAAACAACTCCTGAAATTATTGGGCCCCGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGAGCTCTGAAATCCTTGTCTTCGCAGTGCAAAGAAGCAAGGCGGGAGATAGCTAATTTTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCAAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCTATGTGTGCTCTAGCTAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAGCTACTCAAATTGCGGATACATTGGGGGCTTTGGCTTCCGCTCTTATGATATATGATAACAAGGCCGAAGCTACTAGGACGTCAGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAACTGAAATCTCAATCGCAGTTTCTTGTGAAGGAAAGAACAATTGAAGCCCTGGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTTGCAAATCCAGATGCAAAACATTTGCTAGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGAGGACCTTATAAGAGCCCTCCTTACATTGTGCAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTCTCATCAGAACAACAGCAAGAATGTGCAGTTGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCATTAGTTCAAATTTTGGAAACAGGATCGACAAAAGCAAAGGAAGACTCGGCAAAAATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGAGCTTGTGTGGAGAGTGCTAACGCTGTTCCTGCATTGCTGTGGCTATTGAAGAATGGGAGCTCAAATGGGAAGGAGATAGCGGCGAAAACCTTAAATCACTTAATTCATAAGTCTGATACTACCACAATCAGTCAGCTTACAGCATTATTGACAAGTGATCTACCCGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTTGCCCCTCTTAGCGACATTCAACGAGAAGGTAGTGCTGCGAGTGATGCAATTGATGCAATCATAAAATTAATGAGCTCTAGCAAGGAAGAAACTCAGGCTAAGTCAGCATCAGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGCGAAAGCAGCGTCGCTGTAAAATCCCTTTTGTCTGCCATGAAGTTGCTTGATGCTGAATCTGAAAGTATCCTAATAGAGTCTTCACGCTGCCTTGCGGCAATATTTCTTTCAATTAAAGAGAACAAGGACGTAGCTGCTGTTGCTCGAGATGCATTACTCCCCTTAGTTGCACTTGCAAATTCTTCTACTTTGGAAGTTGCAGAGTTGGCATCATGTGCGGTGGCTAATCTTATTTTAGATAGTGAGATTTCAGAGAAAGCTGTTGCGGAAGAAGTTATCATGCCGGCTACCAGGGTATTACGGGAAGGCACAGTTTCTGGAAAAACCCATGCAGCAGCGGCAATTGCCCGGCTCATACATGCTCGACAAGTTGATTATTCTATAACTGAATGTATTAATCGTGCTGGGACTGTGCTTGCTTTAGTTTCCTTCTTGGATTATTCTATTAATGGATCTGTTTCCACATCAGAGGCTATAGAAGCACTTGCTGTTCTGTCCAGGTCAGAACAGAACGGTGCACATATTAAACCACCATGGGCCGTATTGGCTGAATTCCCTGAAAGCATAAACCCAATAGTGCTGTCTATTGCTGATTCAACACCAGTGTTTCAGGATAAAGCTATAGAGATATTGTCCCAGTTATGCAGGGATCAGCCTGTTGTTCTTGGAAACAATGTTGTTGTGGCCCCTGGATGCTTGTGTTCATTGGCTAAAAGGGTAATTGGTACGAAAAATGTAAAGGTTAAAATTGGGGGAGCTGCACTTCTGATTTGTGCTGCCAAAGTAAACCACCAGAGACTGGTGGAGGAACTCAATCAATCAAACTTGTGTTGTGATCTTGTCCAATCTCTTGTTAATATGCTTTCTTCTGCACCATCTTGTTTGGCAAACCGGGGTGCAGAAAACAAGGAACTCATTAGCATTTTGGTACACAGAAAAGAAGATGCCAATGGTGATGAATCCAACACAGGCACTGCCAGTATATCTGATGCCAACTTAGCCATATGGTTGTTGTCTATTCTTGCTTGTCATGATGAAAAATGCAAAATTGAAATAGTGGAAGCTGGAGCAATTGACATTCTCACTGAAAGAATCTCAGACTGTTACTCACAATATACCCAGATTGATTACAAAGAAGATAGTAGCATCTGGATTTGTGCATTGTTGTTGGCTGTACTATTTCAAGATAGAGATATCATCAGAGCTAATGCAACCATGAAATCTATACCAGCTGTTGCCAGTTTATTGAAGTCAGAGGAATTAGCTAACAGATATTTTGCAGCACAATCAATAGCTAGCCTGGTCTGTAACGGTAGCAGGGGAACACTACTGTCTGTTGCAAACTCAGGGGCTGCAAGTGGGCTAATCTCCTTACTTGGCTGTGCTGACATTGATATACAAGACCTTCTGGACCTGTCAGAGGAATTCTCTTTGGTTCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGTTCCACTTCGCGGAAGGCAATACCGGCACTTGTTGATCTGCTCAAACCAATCCCAGATCGCCCAGGAGCACCCGTTTTAGCTCTTGGACTTCTAACTCAGCTCGCCAGAGATTGCCCATCGAATAAGATTGTAATGGTAGAATCTGGTGCCCTGGAGGCACTAATGAAGTATCTTTCACTGGGTCCCCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTGTTTGATAGTGCTGAGATACGGAGACACGAGGCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTGTTACGTTTAGGAGGAAGAGGTGCAAGATACAGTGCTGCGAGAGCCCTTGAAAATTTGTTCTCTGCTGATCAGATTAGGAATGCAGAGACTTCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACAGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTAAGCGAAAATCCGTCGAGAGCACTAGCTGTTGCTGATGTTGAAATGAATGCAGTAGATGTGCTTTGCAGGATCCTTTCATCAAATTGTTCATTGGACCTCAAAGGGGATGCTGCCGAATTATGTTGTGTTTTGTTTGGAAATACGCGGATCAGGTCCTCAGTGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTTTAGTCCTGCCCAGCATTCAGTGGTCCGTGCACTGGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGATGCTCACGGTGCCATTATTCCTCTTGTTGGTCTTCTCTACGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAAGACAGACCTGCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTGGACATTCTCCATGAAGCACCTGATTATCTGTGTGCCGCTTTTGCAGAATTGCTGCGTATCTTGACCAATAATGCCAGCATAGCTAAGGGACAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTTGGGCCTGATGGACAGCACAGTGCGTTGCAGGTTTTGGTTAATATCTTGGAACATCCACCATGTCGTGCTGACCATAGATTGACATCGCAGCAAGCTATTGAACCACTTATCCCCTTGCTCGATTCTCCAATACCAGCAGTGCAACAACTGGCTGCTGAGCTTCTCTCACATCTTCTTTTGGAAGAACACCTTCAGAAGGATCCATCTACACAGCAGGTAATTGGTCCCCTTATTCGTGTTATTGGCTCTGGTATTCACATATTACAGCAGAGAGCTGTGAAGGCCCTAGTTAGTATTGCACTTATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAACTTTCGAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTGCCTATTGCCGTGTTGGTAAGGTTGCTTCGTGCTGGCTCAGAGAGCACAGTTATTGGCGCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGCGGTGCCATAGAGGCTCTCTTAGAGCTTTTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTAAACAACGTCAAGATTAGAGAATCAAAAGCTACCAGATCAGCTATTGTACCGTTATCCCAGTACCTCTTGGATCCACAAACCCAAGGACAGCAGGCAAGGTTACTAGCAACTTTGGCTCTTGGCGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGCGATGCAGTTTCTGCATGTCGCGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAGTGAAAGTTGTCGCGATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGATCAAATAGAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGAAACATCTGTTCAGGCTGCAATGTTCGTTAAACTTCTCTTCTCTAATAATACAATTCAAGAATATGCATCAAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAGCGTGAATGATGAGTATTTGAGAGCCTTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAGCTACACTTAGCATTCCCCATATGGTTACATCATTAAAAACGGGTTCGGAGGCCACTCAAGAAGCTGCCTTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTCTCAAGAGCTCAGTCAATAGCAGCTGCAGATGCTATTCCTTTACTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCCTATTGCAGTGTTTGCCTGGCACATTAGTTGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAGGCAAACCGCGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCTTGGTCCTTTGAGAGCCCTCCAAAAGGCCAAAAGCTTCATATTTCCTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCTTTTGGGAAAGTAACAATCCAAATTGATCGCGTGGTAATGCTTGGATCTGTTGCTGGCGAATACACTCTTCTGCCACAAAGTAAAAGTGGTCCCCCAAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAATGA 6456 0.4449 MAATLAWRLGSNNGGSLASNDMERNGEGNIPDSEPPTPHSVLKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRENVFSAVGSHSQAVPVLVSLLRSGSLSVKIQAVTVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPALWEQLQKGLKTGNVVGGLLTGALKNLSSNTEGFWNATIQAGGVDILMKLLTTGHPSTSANVCFLLASMMMEDASVCSNVLSSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANFNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCTSATQIADTLGALASALMIYDNKAEATRTSDPLVVEQTLLKQLKSQSQFLVKERTIEALASLYGNPVLSIKLANPDAKHLLVGLITMAVNEVQEDLIRALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSAASDAIDAIIKLMSSSKEETQAKSASALAGIFEMRKDVRESSVAVKSLLSAMKLLDAESESILIESSRCLAAIFLSIKENKDVAAVARDALLPLVALANSSTLEVAELASCAVANLILDSEISEKAVAEEVIMPATRVLREGTVSGKTHAAAAIARLIHARQVDYSITECINRAGTVLALVSFLDYSINGSVSTSEAIEALAVLSRSEQNGAHIKPPWAVLAEFPESINPIVLSIADSTPVFQDKAIEILSQLCRDQPVVLGNNVVVAPGCLCSLAKRVIGTKNVKVKIGGAALLICAAKVNHQRLVEELNQSNLCCDLVQSLVNMLSSAPSCLANRGAENKELISILVHRKEDANGDESNTGTASISDANLAIWLLSILACHDEKCKIEIVEAGAIDILTERISDCYSQYTQIDYKEDSSIWICALLLAVLFQDRDIIRANATMKSIPAVASLLKSEELANRYFAAQSIASLVCNGSRGTLLSVANSGAASGLISLLGCADIDIQDLLDLSEEFSLVRYPDQVALERLFRVDDIRVGSTSRKAIPALVDLLKPIPDRPGAPVLALGLLTQLARDCPSNKIVMVESGALEALMKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETSRQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSVAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVDAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPPCRADHRLTSQQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPSTQQVIGPLIRVIGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRESKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEVKVVAICALQNLVMHSRSNRRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWATGSVNDEYLRALNALFSNFPRLRATEPATLSIPHMVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTAVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPPRNLEIEFQWSNK 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1418 2151 Pfam C2 domain 2030 2120 IPR000008 -
Lele21g1418 2151 Gene3D - 816 1171 IPR011989 -
Lele21g1418 2151 Gene3D C2 domain 2028 2151 IPR035892 -
Lele21g1418 2151 SUPERFAMILY ARM repeat 1580 2028 IPR016024 -
Lele21g1418 2151 SMART arm_5 1730 1769 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 136 176 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 817 859 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 311 360 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 567 607 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1398 1438 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1569 1607 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1857 1897 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 733 771 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 525 565 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1229 1270 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 94 135 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1439 1479 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1037 1087 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1481 1521 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 646 686 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 268 309 IPR000225 GO:0005515
Lele21g1418 2151 SMART arm_5 1311 1352 IPR000225 GO:0005515
Lele21g1418 2151 Gene3D - 647 794 IPR011989 -
Lele21g1418 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1196 1240 IPR000225 GO:0005515
Lele21g1418 2151 CDD C2 2032 2122 - -
Lele21g1418 2151 SUPERFAMILY ARM repeat 65 293 IPR016024 -
Lele21g1418 2151 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2030 2151 - -
Lele21g1418 2151 SMART C2_3c 2031 2127 IPR000008 -
Lele21g1418 2151 Gene3D - 49 409 IPR011989 -
Lele21g1418 2151 Gene3D - 410 646 IPR011989 -
Lele21g1418 2151 MobiDBLite consensus disorder prediction 12 58 - -
Lele21g1418 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1825 1868 IPR000225 GO:0005515
Lele21g1418 2151 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Lele21g1418 2151 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Lele21g1418 2151 ProSiteProfiles C2 domain profile. 2011 2128 IPR000008 -
Lele21g1418 2151 SUPERFAMILY ARM repeat 509 859 IPR016024 -
Lele21g1418 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Lele21g1418 2151 Coils Coil 297 324 - -
Lele21g1418 2151 SUPERFAMILY ARM repeat 1365 1654 IPR016024 -
Lele21g1418 2151 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2151 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele21g1418 2151 Gene3D - 1397 1699 IPR011989 -
Lele21g1418 2151 SUPERFAMILY ARM repeat 957 1383 IPR016024 -
Lele21g1418 2151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2030 2135 IPR035892 -
Lele21g1418 2151 SUPERFAMILY ARM repeat 218 609 IPR016024 -
Lele21g1418 2151 Gene3D - 1817 2026 IPR011989 -
Lele21g1418 2151 Gene3D - 1177 1395 IPR011989 -
Lele21g1418 2151 Gene3D - 1700 1816 IPR011989 -
Lele21g1418 2151 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1380 1614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1418 Lele-ChrLele21 22646989 22657593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1418 457 634 U-box Gene Family AT3G46510 30.435 8.21e-08 55.8