Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1403 ATGGGAGCTTCTGGTTTCACCTATAAATCCATGCCACCACCCTCTGCTTCTTCCCCACCACTCTCTCCCTCATCAATCTCTCCTCCTCCTCCAATCTCTCATTCATTACTTTCTCTGGTTTTCTCTCTTCCCGACCTCATTCATTCTTCTGCAATCTTTAGAGACATGACGCAGCAGAATGTGGTGGTCTCTGAGGCCAATTCCAGAATCAACCTGGCTTTCACTGCCGCCGTCTCTAACTCCTTCAATTTCACCACCGCACCTCAGAAGCCCCCCGCCCCACCCGGTGCAGGCGGCGGCTTCATCTCCATCTCAAGGAATAAGAAGTTCCTTAAGACCCTGGACATCAATGGAGCCGCCCAAATCAATTCCTGGGTTGATTCCATTCGTGCCTCTTCCCCTACCCACCACCATTCCACTTCTTTCCCCACCTCTCCTTTCGACCCAGAACACGACTCTTGGATCCTTCATCACCCATCTGCATTAGAGATGTTTGAGGAAATCATCGAAGCTTCCAGAGGAAAACAAATAGTGGTGTTTCTCGACTACGACGGGACGCTCTCCCCCATCGTCGACGACCCTGATCGTGCTTTCATGTCCGAAGCGATGAGGAAGACGGTGAGAAACCTGGCGAGGTGTTTTCCGACTGCTATAGTAAGCGGAAGATGCAGAGACAAGGTGTACAACTTTGTTCGCTTGGCAGAGCTATATTATGCAGGAAGCCATGGAATGGACATTAAAGGCCCGACTAAAATCTCTAAATACAATAAAGACATCAAAGCGATTCTGTTTCAGCCTGCCTGTGAATTTTTACCCATGATAGACAAGGTTTATCAACTTTTAATTGAGAAAACAAGCTCAACTCCAGGAGCTAAGGTGGAGAACAACAAGTTCTGTGTATCTGTTCATTTTCGCTGTGTTGACGAAAAGAAATGGAGCGAGCTGGCGAACCAAGTTAGATCAGTGTTAAAGGAGTTCCCAAAGCTTCGTCTTACTCAAGGAAGAAAGGTACTTGAGATTCGTCCCCCGATTAAATGGGACAAAGGGGAAGCCTTGGAATTTTTGTTAGAGTCACTTGGTTTTGCCAACTGTACAGACGTGTTCCCTGTTTACATTGGCGACGATCGATCCGATGAAGATGCATTCAAGAAACTTAGAGAGAGAGGACAAGGTTATGGCATTCTTGTCTCCAAATTCCCGAAAGATACGAGTGCATCTTACTCTTTGCAAGAACCCGACGAGGTGATGGATTTTCTGCAGCGATTAGTGGAATGGAAGAGGGTTTCGGTGAGAGCACGTTGTAGGGTGTAA 1311 0.4729 MGASGFTYKSMPPPSASSPPLSPSSISPPPPISHSLLSLVFSLPDLIHSSAIFRDMTQQNVVVSEANSRINLAFTAAVSNSFNFTTAPQKPPAPPGAGGGFISISRNKKFLKTLDINGAAQINSWVDSIRASSPTHHHSTSFPTSPFDPEHDSWILHHPSALEMFEEIIEASRGKQIVVFLDYDGTLSPIVDDPDRAFMSEAMRKTVRNLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKISKYNKDIKAILFQPACEFLPMIDKVYQLLIEKTSSTPGAKVENNKFCVSVHFRCVDEKKWSELANQVRSVLKEFPKLRLTQGRKVLEIRPPIKWDKGEALEFLLESLGFANCTDVFPVYIGDDRSDEDAFKKLRERGQGYGILVSKFPKDTSASYSLQEPDEVMDFLQRLVEWKRVSVRARCRV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1403 436 CDD HAD_TPP 178 416 - -
Lele21g1403 436 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 179 387 IPR006379 -
Lele21g1403 436 FunFam Trehalose 6-phosphate phosphatase 177 262 - -
Lele21g1403 436 SUPERFAMILY HAD-like 178 426 IPR036412 -
Lele21g1403 436 Gene3D - 290 433 IPR023214 -
Lele21g1403 436 Gene3D - 177 262 IPR023214 -
Lele21g1403 436 FunFam Trehalose 6-phosphate phosphatase 273 432 - -
Lele21g1403 436 TIGRFAM T6PP: trehalose-phosphatase 175 423 IPR003337 GO:0003824|GO:0005992
Lele21g1403 436 MobiDBLite consensus disorder prediction 1 27 - -
Lele21g1403 436 Pfam Trehalose-phosphatase 180 412 IPR003337 GO:0003824|GO:0005992
Lele21g1403 436 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 99 430 IPR044651 GO:0004805|GO:0005992
Lele21g1403 436 MobiDBLite consensus disorder prediction 13 27 - -
Lele21g1403 436 FunFam Trehalose 6-phosphate phosphatase 267 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1403 Lele-ChrLele21 22500861 22503771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1403 166 422 Trehalose Biosynthesis Gene Families AT1G70290 27.338 1.45e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1403 21 22500861 22503771 Lele23g0612 23 4634421 4639453 hybridization
Lele21g1403 21 22500861 22503771 Lele24g1350 24 19541524 19546121 hybridization