Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1383 ATGGCTGGATGTTGCAGCTTCACCGCCTCGCTTGACCGGGGCTACAGCTACTCCTTCTACAACGCCGGCTTCATATCGGCCACCGCCGGTCTCGGCGACGGTACGACCATGCATTGCTGGGTCCCCAGAACCCACAAGGAGTCCAAGCCTACTCTGCTTCTCATCCACGGGATCGGAGCCAACGCAATGTGGCAATGGAACGACTTCCTTTCTCCACTAACCCGTCGCTTCAATGTTTACGTTCCGGACTTGGTTTTCTTCGGCGACTCCTACACGACCCGACCCGATAGGTCCGAATCGTTCCAGGCCAGATGCGTGATGAGCCTCATGGAAGCTCACGGTGTGAGGAAAATGAACGTGGTTGGCGTGAGCTACGGTGGTTTTGTGGCCTATAGCATGGCGGCACAGTTTCCAGATAAGGTGGAAAAGGTCGTAGTGTGTTGTGCTGGAGTGACCTTGGAAGAGAAAGATATGGATGAAGGGATGTTTCAGGTGAAAAGTGTGGACGAGGCTGTGAGTATTTTGCTGCCACAAACACCGGAGAATATGAAGAAGCTGATTGAGATGACATTTGCGAAGCCTATGGAAGTTTTGCCTTCTTGCTTTCTCACTGATTACATCGATGTAATAGGCAATAGCAGAACGGCAAGTTGTCCGGAAGAATCCTGTATGGAGTACTATAAAGTAAATATTGAAAATGTCAAGTTGATCTGTTATGATGCCAATGAATGTCATTGTTCTTTCCCGACATATATTATCTGGGGAGAAAAGGACCTGGTATTTCCAATTGAATTAGCACACAGACTCAAACGGCATCTGGGAGATAACGCACAACTATTTGTCATTAAGAACGTAGGGCATGCTCTCAATATAGAGAAGCCTAAGGAGTTGTATAAGTCTGAAACCTACCTTTTTATTTCCAGTCATGTCATCATTAGCATTGTTCACAAAATATTGAGTGCTGTGGCTTTCAACTTCAAGATCTGTGCAGTGCATGTGGACATGCATGGTGGTGAGATGGTAATGGTGGAGTATTCATTTACTCTTCCCTTTCGTTTATCTTTCCCTGCCCTTCCCCTCTCTCTACCGTCAGAGAGAGCGAAGCGGCCCAGGTTAAGTGAAAGGCACACACTAACAGGTATATTGAATGGCTGTTACACCTTTTGGAAGTACATCTGTTGCACAATGGGGAGTTCACCTTCAATCTTCCTTGAGGCCCTGTTTGACTGGCAAGGTCTGTCAAGCAGGGTTAGTTTGATGGCTTCTGCGAGTTCAAGTTTTTGTTCTCGGGGTTCTATGCACCTCCTGTTTGGCCTGGGTTCATCTCAAACATCACATCGTCACAAGGGATCAAGGTTGATAGTTAGAGCAGATACAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATTCCAGTAAATCTGAAATTAAGACTGCTTATCGTAAACTTGCCCGGAATTACCACCCAGACGTGAACAAGGCAATGTGCATAGTTATTAATAGCACAGTGTGCATCATTCACTTTTGTTTGTGCTGCAGAGAAGCTGGAGCAGAACAGAAATTTAAGGAAATCAGCAATGCGTATGAGGTCTTATCAGATGATGAGAAGAGGTCCATATATGACACATACGGAGAGGCTGGACTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGTAATCCATTTGATCTGTTTGAGACGCTGTTTGAGGGCATGGGGATGAATCGTGGCATGAACAACAGAGGCGCTTGGAATGGAGCTGTTGATGGTGAAGATGAATATTACAATCTTGTCTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAAGAGATAGGGATAAGCCACCTAGAGAATTGTGGAACTTGCAATGGTACTGGGGCTAAGCCGGGGACCACGGCAACCAAATGTAGCACCTGTGGAGGCCAAGGCCGGGTTGTCTCATCAACAAGGACACCCTTAGGCATTTTCCAGCAGTCAATGATATGCTCTGCATGTAATGGAACTGGAGAAATTGCAACGCCTTGCAATGCATGTTCTGGGGATGGTCGAGTGAGGAGAACAAAGCGGATAAGTCTGAAAGTTCCGCCGGGTATTGACTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGCAATGCAGGAAGACGGGGTGGTTCTCCCGGCGACCTCTTTGTTGTCATTGAAGTCATTCCAGATCCTGTCCTCAAGCGTGATGACACTAACATCCTATACACTTGTAAGGTGTCATACATTGACGCAATCTTGGGGACTACAATCAAGGTTCCTACCGTAGATGGAACGGTTGATCTAAAAGTCCCAGCTGGGACCCAACCCAACACAACGCTCGTCATGGCAAAGAAAGGTGTTCCTTTTCTGAATAAAAGCAATATGAGGGGAGATCAATTGGTTCGTGTACAAGTTGAAATACCTAAAAGACTCAACAGTGAAGAGAGGAAGCTTATTGAGGAGCTTGCTGATTTAAGCAAAGGCAAGGCTGCGGCAAGTAGATAA 2511 0.4632 MAGCCSFTASLDRGYSYSFYNAGFISATAGLGDGTTMHCWVPRTHKESKPTLLLIHGIGANAMWQWNDFLSPLTRRFNVYVPDLVFFGDSYTTRPDRSESFQARCVMSLMEAHGVRKMNVVGVSYGGFVAYSMAAQFPDKVEKVVVCCAGVTLEEKDMDEGMFQVKSVDEAVSILLPQTPENMKKLIEMTFAKPMEVLPSCFLTDYIDVIGNSRTASCPEESCMEYYKVNIENVKLICYDANECHCSFPTYIIWGEKDLVFPIELAHRLKRHLGDNAQLFVIKNVGHALNIEKPKELYKSETYLFISSHVIISIVHKILSAVAFNFKICAVHVDMHGGEMVMVEYSFTLPFRLSFPALPLSLPSERAKRPRLSERHTLTGILNGCYTFWKYICCTMGSSPSIFLEALFDWQGLSSRVSLMASASSSFCSRGSMHLLFGLGSSQTSHRHKGSRLIVRADTDYYSVLGVSRNSSKSEIKTAYRKLARNYHPDVNKAMCIVINSTVCIIHFCLCCREAGAEQKFKEISNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGMNRGMNNRGAWNGAVDGEDEYYNLVLNFKEAVFGVEKEIGISHLENCGTCNGTGAKPGTTATKCSTCGGQGRVVSSTRTPLGIFQQSMICSACNGTGEIATPCNACSGDGRVRRTKRISLKVPPGIDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKVPAGTQPNTTLVMAKKGVPFLNKSNMRGDQLVRVQVEIPKRLNSEERKLIEELADLSKGKAAASR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1383 836 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Lele21g1383 836 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Lele21g1383 836 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Lele21g1383 836 SUPERFAMILY HSP40/DnaJ peptide-binding domain 588 742 IPR008971 GO:0006457|GO:0051082
Lele21g1383 836 Gene3D - 620 683 - -
Lele21g1383 836 ProSiteProfiles Zinc finger CR-type profile. 607 688 IPR001305 GO:0031072|GO:0051082
Lele21g1383 836 Pfam DnaJ central domain 620 683 IPR001305 GO:0031072|GO:0051082
Lele21g1383 836 ProSitePatterns Nt-dnaJ domain signature. 521 540 IPR018253 -
Lele21g1383 836 SMART dnaj_3 459 536 IPR001623 -
Lele21g1383 836 ProSiteProfiles dnaJ domain profile. 460 544 IPR001623 -
Lele21g1383 836 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 607 686 IPR036410 -
Lele21g1383 836 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Lele21g1383 836 PRINTS Epoxide hydrolase signature 120 133 IPR000639 GO:0003824
Lele21g1383 836 PRINTS Epoxide hydrolase signature 134 147 IPR000639 GO:0003824
Lele21g1383 836 PRINTS Epoxide hydrolase signature 248 264 IPR000639 GO:0003824
Lele21g1383 836 PRINTS Epoxide hydrolase signature 76 91 IPR000639 GO:0003824
Lele21g1383 836 Pfam DnaJ domain 460 541 IPR001623 -
Lele21g1383 836 SUPERFAMILY Chaperone J-domain 456 574 IPR036869 -
Lele21g1383 836 FunFam Putative Mitochondrial DnaJ chaperone 675 725 - -
Lele21g1383 836 SUPERFAMILY alpha/beta-Hydrolases 27 298 IPR029058 -
Lele21g1383 836 Gene3D - 590 725 - -
Lele21g1383 836 Hamap Chaperone protein DnaJ [dnaJ]. 457 833 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele21g1383 836 Gene3D DnaJ domain 457 581 IPR036869 -
Lele21g1383 836 TIGRFAM DnaJ_bact: chaperone protein DnaJ 460 826 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele21g1383 836 Pfam alpha/beta hydrolase fold 50 152 IPR000073 -
Lele21g1383 836 PRINTS DnaJ domain signature 536 555 IPR001623 -
Lele21g1383 836 PRINTS DnaJ domain signature 516 536 IPR001623 -
Lele21g1383 836 PRINTS DnaJ domain signature 480 495 IPR001623 -
Lele21g1383 836 PRINTS DnaJ domain signature 462 480 IPR001623 -
Lele21g1383 836 Pfam DnaJ C terminal domain 595 810 IPR002939 -
Lele21g1383 836 Gene3D alpha/beta hydrolase 22 301 IPR029058 -
Lele21g1383 836 CDD DnaJ_zf 620 683 IPR001305 GO:0031072|GO:0051082
Lele21g1383 836 Gene3D - 730 836 - -
Lele21g1383 836 CDD DnaJ_C 591 813 - -
Lele21g1383 836 CDD DnaJ 460 533 IPR001623 -
Lele21g1383 836 FunFam Chaperone protein dnaJ 1, mitochondrial 730 836 - -
Lele21g1383 836 FunFam Molecular chaperone DnaJ 612 688 - -
Lele21g1383 836 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 421 833 - -
Lele21g1383 836 SUPERFAMILY HSP40/DnaJ peptide-binding domain 735 821 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1383 Lele-ChrLele21 22299167 22312728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1383 461 543 C2H2 Transcription Factor Family AT1G74250 37.349 1.99e-08 55.8