Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1364 ATGCGTCCCGAAGAAAAGATACTCTACGGTCGCGGACCCCTTCAATTATCGTGGAACTTCAACTATGGACCCGCCGGAGAGCGCAATGGATTCGACGGGCTAAAGGCGCCGGAGACGGTGGCAAATGATGCGGTGGTGTCCTTCAAGACCGCTCTCTGGTACTGGATGCAACAAGTTCACCCTGTGGTCGACCAAGGCTTTGGCGCTACCATTAGAGCCATCAATGGCGGCCTCGAATGTGGCAGCCATGCTGATCCCCGCAGTGTTGGGGCTCTTGTTAATTACTACATCAATTACTGCTCTCAACTGGGTGTTGATCCAGTGTTATGTACGACGACTCTCTGGACTTTGTACAGTAACGGGAAGAAGCAAGGCTATGCAGTGAAACGCAGGCCTTCGAATGTGGACATGGAAGTGTTGAGGTTGATGCGTAAGCCAGATGAACTCCGTAATAACCAAGCAGCTGCAATGAAAAATGCATTTTCACATAAGATGCGAAAGCTTGCGTGCTTGTACATACTGGAAGGAAATAATAAATCATGTCCATCACCTCAGGAACATATAATAGTTTTAAGTTGGGCATATGGTAGATCAATGGAAATTCCATCAAAACTTAAGCTATCATCAGAGGCACTTTTGCGCCCACAAAGTGTTTCTCGGATGTCTCTTTTTAAGCAAGCATGTCACCCAAGCAAACAAAAACTAACAGAATCGGAGTTCTCTCACGACTGGAGAGTACCTTCTCTTCTCTATATTTTCCCTTTAGAAGTCCAAATCTTCATTCCAAAACCTAATCCCCAATATTCTCTTTCTTCTCAATCAATTTCCCATCAGCGCCCTTTTGCCACATTCCGATTCTTTCTTCTTCTGGCAAACAATCCCCACATGCTTCCCCGTTCTATCAGACAAACCCTCATCCAAAAATCTGATTCTCCTAACAAACAACGCTTTCCCGTTTCCGTTTTGGGATTTTTGCGCCGCTACTTCTCTGCTAAGAAAGCTGATGGGGCCTCGAGGACGGAGGAAGAAGAAAGAGTTTACTCATGGTTATATGCTTTGGCTCGCTCTGAAAGAAACTTGGTCTTTGAGTACGTTCGTTCCACTGAAAGAGGCTTAAGTTTCACTGAAGCAGAGAGGAGACTGAAGGAAAATGGACCAAATGTTCTGCATGAGCATACTTTTCCAAGCTGGTGGCATCTTCTATGGAGTGCACTTTTTCATCCTTTCAATATCATTCTGATTGTCTTGTCAAGCTTGTCCTTCATAACCCGTGACATTCCAAATGGTTGTATCATGCTCACACTTGTTTTTATCAGTGTCTCCCTTCGTTTCTGTCAGGAGTACAGCAGTTCAAAAGCAGCCATGAAGCTTTCGGAATTTCTAAGATACCCAATAAAAGTTCAAAGATGTGCAGGCAGAATTGTGCAACAAGAATTAGTAGTTCAAATTGATCAGAGGGATATAGTTCCTGGTGACATTGTGATTTTCGAACCTGGGGACCTCTTTCCTGGAGATGTTAGATTGTTATCTTCCAAAAATCTTGTTGTAAGCCAGTCCTCACTAACTGGGGAATCTTGGACCACTGATAAAACTGCCGATGTCAGAGAAAGTCTCAGCACTCCTTTGTTAGATTTAAAGAACATTTGTTTCATGGGCACAAACGTGGTATCTGGAGGTGGAACAGGCCTAGTTATATCAACTGGATCTGATACATACATGAACACCATGTTCTCAAAGATTGGGAAGAAGAAGCCACCAGATGAATTCGAATATGGTCTACGTTGGATATTTTATGTGCTCGTGGCTATTATGCTAGTGGTAGTAACAGTCATATTTGTAACAGATTACTCTACTTCTGAAGATTTGAGCACAAGTATTCTTTTTGCAATCTCTGTGGCATCTGCCCTCACTCCTCAAATGCTTCCCCTCATCATCAACACTTGCCTTGCAAAAGGAGCGCTCGCCATGGCTCGAGACCGATGTATAGTCAAAAGTTTAGCGTCAATACGCAACATGGGATCGATGGATATCCTTTGTATTGACAAGACAGGTACACTGACTATGAACCGTGCAATTATGGTAAATCATCTTGACTGCCATGGGATAACGCAAGAGAAAGTTCTACGCTTTGCATTCCTCAATTCTTACTTCAAGACAGATCAGAAGTATCCTCTGGATGATGCCATATTGGCTTTTGTATATTCAAATGGATTCAGATTTCATCCCTCAAAATGGACGAAAATAGATGAGATTCCTTTTGATTTCATACGTAGAAGAGTATCTGTCATCATAGAAACAGAGTCGCATATTGAAGACAGGCAGTCTCAGTTATTTGGCAGGTTCATGGTAACTAAAGGGGCATTGGAAGAAGTAATGAGAGTTTGTTCTTTCATTGAGAATTTCAATAACAATGAAGTTTCCAAGTTCTCTGAAGATGATTATAACAGAATTTTAGCCTTGGCGGAAGGATTGAGCAATGAAGGGTTAAGAATTATAGGAGTAGCTATAAAGAAGCTAGAAATGCAAAACAGCGAAACAAGCACCGGAAGAAGTAAGAGCATTGAAGAAAATGTTGAGACAGACATGGTGTTTCTTGGTGTCATAACATTCTATGACCCTCCCAAGGACTCAGCAGAACAAGCGCTGTGGCGCTTAGCAGAGAAAGGAGTCAAAGCAAAAGTTTTGACGGGGGATTCACTTTCCTTAGCCATGAGGGTATGCAGAGAAGTAGGCATCAGAACTACCCATGTAATCACAGGGCCTGAGCTCGACCGATTAGACCAAGAAACTTTCCATGAAACTGTCAAAAGAGCAACAGTACTAGCTAGGCTTACACCAATTCAGAAACTGCGTGTAGTCCAATCCTTACAGACAATGGGAAACCATGTTGTCGGGTTCTTGGGAGATGGCATTAACGATTCACTTGCCCTCGATGCTGCCAATGTAAGCATTTCAGTGGACTCAGGCGTAGCAATTGCCAAAGACATGGCAGACATTATACTGCTTGAGAAAGATCTTAATGTTCTTGTGGCAGGAGTAGAACATGGTAGACTCACTTTTGGAAACACAATGAAGTACATTAAAACATCGGTTGTCGCTAACTTAGGAAGCGTGCTTTCGCTGCTCATAGCGACCTTGGCGCTTAAATTCGAGCCCGTGACTTCAAGACAGCTTCTTACTCAGAATTTCCTGTATAGTGTAGGACAAATCGCTATTCCATGGGACAAAATGGAGGAAGATTATGTGAAGAGTCCTAAGAAATGGTCAGAGAGAGGATTACCTATGTTCATATTGTGGAATAATCCTGTGTGCACTCTTTGTGATGTTGGGGCTCTTTTGTTTATTTGGTACTATTACAAGGCTTACGGGGATCAAAAGTTTTGCCATTCGGCTTGGTTCGTTGAGGGGTTAATGATGCAGACTCTGATTATCCACTTCATAAGAACTGAGAAAATTCCATTTATACAAGACGTAGCTTCATGGCCCGTGATTTGTTCCACTGTTGTTATTTCCTGTATTGGAATCGCACTTCCATTCACACCTATTGGAGAAGTCATGGGACTCACGAGTCTACCTCTCTCGTATTTTGGGTTTTTGGTGGTTCTTTTTCTGTTTTATTTCACAATTGGCCAAGTGGTCAAGAGACTTTACATATTTGTTTATAAAAGATGGCTTTGA 3678 0.426 MRPEEKILYGRGPLQLSWNFNYGPAGERNGFDGLKAPETVANDAVVSFKTALWYWMQQVHPVVDQGFGATIRAINGGLECGSHADPRSVGALVNYYINYCSQLGVDPVLCTTTLWTLYSNGKKQGYAVKRRPSNVDMEVLRLMRKPDELRNNQAAAMKNAFSHKMRKLACLYILEGNNKSCPSPQEHIIVLSWAYGRSMEIPSKLKLSSEALLRPQSVSRMSLFKQACHPSKQKLTESEFSHDWRVPSLLYIFPLEVQIFIPKPNPQYSLSSQSISHQRPFATFRFFLLLANNPHMLPRSIRQTLIQKSDSPNKQRFPVSVLGFLRRYFSAKKADGASRTEEEERVYSWLYALARSERNLVFEYVRSTERGLSFTEAERRLKENGPNVLHEHTFPSWWHLLWSALFHPFNIILIVLSSLSFITRDIPNGCIMLTLVFISVSLRFCQEYSSSKAAMKLSEFLRYPIKVQRCAGRIVQQELVVQIDQRDIVPGDIVIFEPGDLFPGDVRLLSSKNLVVSQSSLTGESWTTDKTADVRESLSTPLLDLKNICFMGTNVVSGGGTGLVISTGSDTYMNTMFSKIGKKKPPDEFEYGLRWIFYVLVAIMLVVVTVIFVTDYSTSEDLSTSILFAISVASALTPQMLPLIINTCLAKGALAMARDRCIVKSLASIRNMGSMDILCIDKTGTLTMNRAIMVNHLDCHGITQEKVLRFAFLNSYFKTDQKYPLDDAILAFVYSNGFRFHPSKWTKIDEIPFDFIRRRVSVIIETESHIEDRQSQLFGRFMVTKGALEEVMRVCSFIENFNNNEVSKFSEDDYNRILALAEGLSNEGLRIIGVAIKKLEMQNSETSTGRSKSIEENVETDMVFLGVITFYDPPKDSAEQALWRLAEKGVKAKVLTGDSLSLAMRVCREVGIRTTHVITGPELDRLDQETFHETVKRATVLARLTPIQKLRVVQSLQTMGNHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKTSVVANLGSVLSLLIATLALKFEPVTSRQLLTQNFLYSVGQIAIPWDKMEEDYVKSPKKWSERGLPMFILWNNPVCTLCDVGALLFIWYYYKAYGDQKFCHSAWFVEGLMMQTLIIHFIRTEKIPFIQDVASWPVICSTVVISCIGIALPFTPIGEVMGLTSLPLSYFGFLVVLFLFYFTIGQVVKRLYIFVYKRWL 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1364 1225 Pfam Cation transporting ATPase, C-terminus 1051 1216 IPR006068 -
Lele21g1364 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 681 687 IPR018303 -
Lele21g1364 1225 CDD chitinase_GH19 9 107 - -
Lele21g1364 1225 Gene3D - 676 1004 IPR023214 -
Lele21g1364 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 367 1222 IPR023298 -
Lele21g1364 1225 PANTHER CATION TRANSPORTING ATPASE 359 1215 - -
Lele21g1364 1225 SFLD Haloacid Dehalogenase 661 1017 - -
Lele21g1364 1225 Gene3D - 463 567 - -
Lele21g1364 1225 SUPERFAMILY Lysozyme-like 8 107 IPR023346 -
Lele21g1364 1225 SUPERFAMILY HAD-like 858 1015 IPR036412 -
Lele21g1364 1225 Pfam Cation transporter/ATPase, N-terminus 365 420 IPR004014 -
Lele21g1364 1225 Pfam haloacid dehalogenase-like hydrolase 675 981 - -
Lele21g1364 1225 Pfam Chitinase class I 6 59 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele21g1364 1225 Gene3D - 691 871 IPR023299 GO:0000166
Lele21g1364 1225 SFLD p-type atpase 661 1017 IPR044492 -
Lele21g1364 1225 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 352 1224 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 Pfam Protein of unknown function, DUF617 109 145 IPR006460 GO:0010274
Lele21g1364 1225 Gene3D - 427 1175 - -
Lele21g1364 1225 Gene3D Endochitinase, domain 2 6 42 - -
Lele21g1364 1225 SMART Cation_ATPase_N_a_2 352 425 IPR004014 -
Lele21g1364 1225 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 929 1046 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1364 1225 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 432 721 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g1364 1225 Gene3D - 43 107 - -
Lele21g1364 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 673 874 IPR023299 GO:0000166
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 1025 1040 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 1095 1111 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 1128 1149 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 592 608 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 713 726 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 1075 1088 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 PRINTS Magnesium-transporting ATPase signature 1178 1199 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele21g1364 1225 Pfam E1-E2 ATPase 476 658 - -
Lele21g1364 1225 ProSitePatterns Chitinases family 19 signature 2. 46 56 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele21g1364 1225 SUPERFAMILY Calcium ATPase, transduction domain A 475 578 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1364 Lele-ChrLele21 22090037 22099968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1364 348 1122 Primary Pumps ATPases(2) AT1G07810 25.336 5.77e-55 207