Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1361 ATGAAGTCAAAACCCATAGACTGGTCCCACCTAATGATGCTAATCGTACTGACGAGTCTTCACCGTTGTTCCCATGCACAGCCGGGCACATCAACCACCTGGGCGGGCTCAACCTTGAAAGACGCTCTCACGAAAACTCACTTCAGTATTATTGTCATCGCTTTCCTCTCTTCCATTGTCTTCCTGATTTTCTTCTCCCTCTTTATTCGTCACTGTGTTGATACCTGTGCCCCCACTAATACTCACCCTAACACAGACGCCACTGACCGCCGCCGCCGTGAAGCCGTCGATAAATGTCCCGTCCTTGTGTATTCTGAGGTGAAGGAGCTCAGGATCGGGAATTCTCCTCTCGAGTGTGCGGTTTGCTTGGGCGAGTTCCAGGACACAGACAAAATCCGTTTATTGCCAAAATGCAATCACGTTTTCCATCCCGATTGTATTGATAGGTGGTTCGCTTCACGCCTGACTTGCCCTGTTTGTCGCGCCAAGCTCACTCTGTCAGATTTCGACGACAATGCCGACGCCGTGACGACGGAGTCGAATCGCGATGAATCGCCGGTTTCAGATGCAGAAATAATGGACCAACAGAGCACTGAGGAGTCGCCGGAGCCACAACCGGAGGAAACGATTGAAGTGGATGATGAAAGCGGAAGCACTGGTGTTCCGGCGCAGACTGAAACTAGGTCGAGAACGGCAGCGGAAAGTTTTGAGAGGTCATATTCGACGGGTCACTCTCTGATAATGGAAAGCGAGGGGTTGATTGAGAGGTACACATTGAGATTACCTGAGTACGCGAGGGGGGAGATATTTGGGAGGGAGGAAAGGAATAGGCTTCGCCGTTGCGCGAGCAGCAACGACGTCGTTTTGAGGGGAGAATGGAACTTGAAGAATGGGAGTGATAATATGGAGAGGTGGGTGTTGCAGTCCATGACGCCACCATTCGTTTCAAAGAATTGGAGCTCTGTGAAATTCATGAGGCCGAATACTGATCAAAGCTCTTCGCCGCCGCCGTCGCCTAGGCCTCCGGTTTGA 1032 0.5145 MKSKPIDWSHLMMLIVLTSLHRCSHAQPGTSTTWAGSTLKDALTKTHFSIIVIAFLSSIVFLIFFSLFIRHCVDTCAPTNTHPNTDATDRRRREAVDKCPVLVYSEVKELRIGNSPLECAVCLGEFQDTDKIRLLPKCNHVFHPDCIDRWFASRLTCPVCRAKLTLSDFDDNADAVTTESNRDESPVSDAEIMDQQSTEESPEPQPEETIEVDDESGSTGVPAQTETRSRTAAESFERSYSTGHSLIMESEGLIERYTLRLPEYARGEIFGREERNRLRRCASSNDVVLRGEWNLKNGSDNMERWVLQSMTPPFVSKNWSSVKFMRPNTDQSSSPPPSPRPPV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1361 343 MobiDBLite consensus disorder prediction 218 241 - -
Lele21g1361 343 FunFam E3 ubiquitin-protein ligase ATL6 80 167 - -
Lele21g1361 343 SUPERFAMILY RING/U-box 118 167 - -
Lele21g1361 343 PANTHER RING FINGER DOMAIN-CONTAINING 42 173 - -
Lele21g1361 343 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Lele21g1361 343 Pfam Ring finger domain 118 161 IPR001841 -
Lele21g1361 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 166 IPR013083 -
Lele21g1361 343 CDD mRING-H2-C3H2C2D_ZSWM2 118 161 - -
Lele21g1361 343 SMART ring_2 119 160 IPR001841 -
Lele21g1361 343 MobiDBLite consensus disorder prediction 175 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1361 Lele-ChrLele21 22055980 22057011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1361 11 338 Rapid Response to Elicitors AT3G05200 31.412 1.49e-41 147