Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1358 ATGAGGGTGACGTATACCAAAATGTCCATTGATTTTTTTCTTCCTGCCCATCACAATACGAATGGAAGATGCGCTTTCACTGCTATGCACGTGCGGCACATTGGAACCCTGTCCCTAGCCACCACCCTGGGACGAAGAAGAAGGACAGTCATGGGTCTCTCAAATATCCCTAATTTATCTGAAGGGGTACTTCCTGCGCTTTTGGTGAACACAGTTCTATCAGTGATTCTCCTTAAGAACATGCTGAGATCTGTGTTGGAAGCCGTTGGCGTGACATCCTCGTCGTCTCCATCGTATTCTCAGAACATGGAGGAAGATTCAGACGAAGAAACAGAGCGAGAGAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGGGTGTAGAGGAACAACATCACCATCAACAACAACAACAACAACAACGAGTGACTCTGGTTCGAGTGTCGGAGGATTATCGGGTACGGTGGAGTGCTGCGTATGTTTGTGTGGGTTTGAAGCGAATCAGGAGGTGAGTGAATTGCCCTGCAAGCATTTCTTCCACAGAGCTTGCTTAGACAAGTGGTTCGATAACGAACACTTAACCTGCCCTCTGTGTCGTTCCATAGATTAG 615 0.4732 MRVTYTKMSIDFFLPAHHNTNGRCAFTAMHVRHIGTLSLATTLGRRRRTVMGLSNIPNLSEGVLPALLVNTVLSVILLKNMLRSVLEAVGVTSSSSPSYSQNMEEDSDEETERESWRRRRVSITQYKGCRGTTSPSTTTTTTTSDSGSSVGGLSGTVECCVCLCGFEANQEVSELPCKHFFHRACLDKWFDNEHLTCPLCRSID 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1358 204 MobiDBLite consensus disorder prediction 93 117 - -
Lele21g1358 204 ProSiteProfiles Zinc finger RING-type profile. 159 201 IPR001841 -
Lele21g1358 204 PANTHER - 51 202 IPR044249 -
Lele21g1358 204 SUPERFAMILY RING/U-box 158 202 - -
Lele21g1358 204 Pfam Ring finger domain 158 201 IPR001841 -
Lele21g1358 204 MobiDBLite consensus disorder prediction 129 151 - -
Lele21g1358 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 203 IPR013083 -
Lele21g1358 204 SMART ring_2 159 200 IPR001841 -
Lele21g1358 204 SMART ringv_2 158 201 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1358 Lele-ChrLele21 22026075 22026876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1358 51 202 C3H Transcription Factor Family AT2G04240 34.868 7.61e-20 80.9