Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1354 ATGTCCAAACCGTGGGGTGGTGCCGGAGCTTGGGCCGCCGAGGCCGAGCGCGCCGAGGCCGAAGAGCGTGAGCAAGCGGCAGCAGCTGCCGCTTCGGGATCCCTGAACTTCCCCAGCCTGAAGGAGGCCGTGAATGCGAAGCCTAAGAAGAAGAAAATGTCTCTGTTGGAGTTTAATAGTATTTCCACTGCCGGCGAAGGTGGTATTGGCACCGAGTATAAGGGCCTGACGCAGAATGAGATGCTTCGGCTCCCTACGGGCCCGAAGGATCGTTCTGCGGATGAAATGCTGTATAGTAGTGGGTTCTCCTCTTATGGGCGTTCAGGTCCGCCGCACGGACGCATGCGAGACCGTGACGACAATGATGGTTCATGGGGTGGAGGAAGAAGATCCTATGGAGGATTTGCTGAAGAACGTAGGGGTCCCCCTTCTAGGGTTTCGGATTACGATCAGCCGTCCAGGGCAGACGAGGATGATAATTGGAGCGCGGTTACAAAATATCTTCCATCGTTCGATTCAGGTCGGCAAAATCGCTATGGTTCGCTTGGTGGTGGTTCAAGGTTCGATGAGAAGGATAACTGGTCAGTTGGTAAAAAGCCTTTTCCTGCTAGATCTCCCGCATTTGGTTCTGGGTTTCGCGATTCGGGTGTGGAGCCTGACCGCTGGGCAAGGGGACCACCGCGCGATAACGAGCGGGAGCGTCCCAGATTGATATTGGATCCGCCAAAAGGTAATGCCCCTGTTAATGAACCAGTCAAGACAAATAAGGCGAATCCATTTGGCGCAGCTAGGCCCAGGGAAGAAGTTTTGGCTGAGAAGGGTGTGGATTGGAAGAAGGTGGATTCTGAAATTGAAGCTAAGAAAACAAGTAGGCCTTCAAGTTCGCACTCTATCAGGCCATCCAGTGCTCAATCCAGTCGTTCTGAGGATACAGGGTCGCAGGAGACAGAAACTATGGTAAAACCCAGACCAAAGGTGAATCCATTTGGGGATGCAAAACCCCGAGAAGTATTGCTGGAGGAGCGAGGTAAAGATTGGCGGAAGATTGATCTCGAATTGGAGCATCGCGGTGTTGACAGGCCAGAAACTGTGGAGGAAAAGTTATTGAAAGAAGAAATTGATAATTTGAAGAAGGAGTTTGAGAAAGATTCAACATTAAATTCAAGGAAGGAATCTGTGGAAGAAGCTGGTGGAGACCAAACTAGCCTCCAAGAAATTTTACTTCAGAAGGAAAGGGAGCTGGAATCTCTCATTCATGATTTGGATGACAAAGTTCGTTTTGGGCAAAAAGCTATTGAAAGGCCTGGCTCTGGAGCGGGAAGGCCTGGTTCTGGAGCGGGAAGGCCAGGTTCTGGAGCTGGAAGGGCTGCTGGTTTTCCTGATAGGCCACATTCTCAGTCTGGCTCATTCGATGATTCTAGGAGTGTGGAATTCACGGACAGACCTTCGTCCCGAGGCACAGGAGATGTGTGGACATGGCCCGATGACAGAAGACCATTTCAAGGTGCCAGGGACAGAGGGTTTCCAAACAACAGGGTCTTGGATAGGTCAAGATCGAGAGAGAGATGGGAGCCTGTAATTTTATTAGGAGTTGCAATTCTGCATTTTGTTCCTGATGCTGATGGTGTTATTACCATTAGCAATGGTGTTATTGCCATTAGCGAAAGAACTTTAATGTGTTACCATCTACAGTCAAAGGGTTGA 1704 0.5023 MSKPWGGAGAWAAEAERAEAEEREQAAAAAASGSLNFPSLKEAVNAKPKKKKMSLLEFNSISTAGEGGIGTEYKGLTQNEMLRLPTGPKDRSADEMLYSSGFSSYGRSGPPHGRMRDRDDNDGSWGGGRRSYGGFAEERRGPPSRVSDYDQPSRADEDDNWSAVTKYLPSFDSGRQNRYGSLGGGSRFDEKDNWSVGKKPFPARSPAFGSGFRDSGVEPDRWARGPPRDNERERPRLILDPPKGNAPVNEPVKTNKANPFGAARPREEVLAEKGVDWKKVDSEIEAKKTSRPSSSHSIRPSSAQSSRSEDTGSQETETMVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRGVDRPETVEEKLLKEEIDNLKKEFEKDSTLNSRKESVEEAGGDQTSLQEILLQKERELESLIHDLDDKVRFGQKAIERPGSGAGRPGSGAGRPGSGAGRAAGFPDRPHSQSGSFDDSRSVEFTDRPSSRGTGDVWTWPDDRRPFQGARDRGFPNNRVLDRSRSRERWEPVILLGVAILHFVPDADGVITISNGVIAISERTLMCYHLQSKG 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1354 567 MobiDBLite consensus disorder prediction 376 396 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 1 40 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 217 239 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 293 320 - -
Lele21g1354 567 Pfam Plant specific eukaryotic initiation factor 4B 1 449 IPR010433 GO:0003743
Lele21g1354 567 Pfam Plant specific eukaryotic initiation factor 4B 447 507 IPR010433 GO:0003743
Lele21g1354 567 MobiDBLite consensus disorder prediction 111 125 - -
Lele21g1354 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 522 IPR010433 GO:0003743
Lele21g1354 567 MobiDBLite consensus disorder prediction 428 506 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 376 404 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 266 292 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 166 180 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 133 161 - -
Lele21g1354 567 MobiDBLite consensus disorder prediction 77 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1354 Lele-ChrLele21 21999321 22005540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1354 1 523 Eukaryotic Initiation Factors Gene Family AT3G26400 50.175 5.84e-137 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1354 21 21999321 22005540 Lele21g1354 21 21999321 22005540 ECH
Lele21g1354 21 21999321 22005540 Lele23g0668 23 5156421 5162154 hybridization
Lele21g1354 21 21999321 22005540 Lele24g1307 24 19079886 19085120 hybridization