Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1338 ATGGAAATTCCATTCTCATTCACATACCTTCTCCTACTTCTTGCTCCTTCCTTCGTTTTATCTTCCCCACTTCAAGATCCAGAATTAGTAGTCGAACAAGTACACAAGAGCATCAATGTATCGAGAAGAAACCTGCGGTTTCTTTCTTGTGGGACTGGAAACCCCACTGATGATTGTTGGAGGTGTGATCGCAACTGGGAAAACAACAGGAAGCGTCTCGCAGATTGCGGCATTGGCTTCGGCAAGAACGCCGTTGGAGGCAGAGACGGCAGATTCTACGTCGTCACCGACCCCGGCGACCACCCTGTGAATCCCAAGCCAGGGACCCTCAGATATGGCGTTATACAGAACGAGCCACTTTGGATCATCTTCAAGAAAGACATGGTGATCAAGCTCAAACAAGAACTTCTGATGAACTCCTTCAAGACCATCGACGGCAGAGGAGCCAACGTTCACGTCGCCGGTGGGTTAATCCAGAGAATGCCAAGATGCAGACATGGATACTTCCATGTCGTGAATAATGACTGCACACAGTGGCAGATGTATGCCATAGGAGGGAGTGCTAATCCAACCATAAACAGTCAAGGCAACAGATTTCTTGCTCCTAATGACGGTACCTTCAAAGAGGTGACCAAGAGGGAGGATACACCGGAGAGCGTATGGAAGAAGTGGAACTGGAGATCTTCAGGGGATGAGATGTTAAACGGCGCGTTTTTCACTGCGTCCGGGAAGGGATCGTCTTCGAGCTATGCTCGAGCTTCAAGCTTGTCTGCGAAACCATATTCACTGGTTAGTTCTATAACAGCGGCAGCTGGAGCACTTCAATGCAGAAAGGGCTGGCGTTGTTGA 849 0.4912 MEIPFSFTYLLLLLAPSFVLSSPLQDPELVVEQVHKSINVSRRNLRFLSCGTGNPTDDCWRCDRNWENNRKRLADCGIGFGKNAVGGRDGRFYVVTDPGDHPVNPKPGTLRYGVIQNEPLWIIFKKDMVIKLKQELLMNSFKTIDGRGANVHVAGGLIQRMPRCRHGYFHVVNNDCTQWQMYAIGGSANPTINSQGNRFLAPNDGTFKEVTKREDTPESVWKKWNWRSSGDEMLNGAFFTASGKGSSSSYARASSLSAKPYSLVSSITAAAGALQCRKGWRC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1338 282 SMART amb_all 52 205 IPR002022 -
Lele21g1338 282 PANTHER PECTATE LYASE 18-RELATED 24 156 IPR045032 GO:0030570
Lele21g1338 282 SUPERFAMILY Pectin lyase-like 74 282 IPR011050 -
Lele21g1338 282 Gene3D - 53 156 IPR012334 -
Lele21g1338 282 Gene3D - 157 275 IPR012334 -
Lele21g1338 282 PRINTS Pollen allergen Amb family signature 135 151 IPR018082 -
Lele21g1338 282 PRINTS Pollen allergen Amb family signature 76 93 IPR018082 -
Lele21g1338 282 PRINTS Pollen allergen Amb family signature 99 124 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1338 Lele-ChrLele21 21812470 21813955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1338 152 282 Polysaccharide Lyase AT5G63180 69.925 5.61e-54 179