Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1323 ATGGGTGTATTTTCTCTTCTGATTATACTTATATTTTATCTTTTAGTTTCATCTGCAGTATGCCAAGTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACGGGTAATTACACTGATAAAAGCACAGGACTGGCATGGATTTCAGACAATGGGATTATGAACCATGGCACTACAGTGGATGTCGAAGGTCCAAATGGAAACAGGATACAGTATCAGAAACGAAGAGACTTCCCCATAGACAACAGGAAATACTGTTACACACTAAGCACGGACGAGAGAAGAAGATACCTGGTGCGAGCAACGTTTCAGTATGGAAACTTGAAAAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATATGATGCCTCAAGAGTTTATGTGAAGGAAATGATTATCAGGGCCCCCTCAAGCTCTATTGATGTGTGCTTGTGTTGTACAACCACTGGTTCACCATTCATATCAACTCTAGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGAATTTGAAAACGATTTCTTCTTAAAAGTTGCTGCAAGAATCAATTTTGGCGCTTCAAGTGAGGATGCTATCAGGTATCCTGATGACCCGTATGATAGAATTTGGGAATCAGATCTTGTTAAAAGGCAAAACTATCTTGTTGGGGTGGCCCCAGGCACAGAAAGGATTAATACAACAAAGAACATAGAGATAGGAAGTAGAGAATACCCACCTGTAAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGGGTACTCAGCTACAGAACTAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCTTACTTTGCAGAGATTGAAGATCTGGGTAACAATGAGACTCGAAAATTCAAAATGGAGCAACCTTTTATACCTGACTATAGCAATGCAGTGGTTAACATAGCCGAGAATGCCAATGGGAGCTACACTCTATATGAACCTAGTTACATGAATGTGACTCTGGAATTTGTTCTGTCATTCTCCTTTGTTAGGACCCGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACTGATTGCTCCAAAGATTGACAAGCATGATTTGACTGTTGTAAATGAATTTTCCTCCATGTCAGCTGAAAGTGTCCAGAAGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGTAGTGCTGCCACACTTCCAAGAATCACAAAAATAAACCTGTCAAGAAGGAATGTCACCGGCACAATCCCTTCTGTCATTAACAACATGGAAGAATTGACAGAATTGTGGTTGGATGGAAACTTGATTACAGGGCCACTGCCCGACATGAGCAGTCTTATCAATCTAAAGATAGTGCATCTAGAGAACAACAAATTGAGTGGTCCATTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTGTTCATACAAAATAACTTGTTTACTGGGGAAATACCACCCGGATTAACTTCAGGAAAAATCATCTTCAACTATGATGGCAATCCTGGACTACATAAAGGAACCAAGAAACACTTCAAGTTGATACTGGGAATTTCAATAGGAGTTCTTGTGATTCTAGCAATATTACTTTTAGGAAGTTTGATGCTAATGCATAATCTTCGAAAGGCATCCCAACAGAAAAGTGATGAAAATGGTATCTCTGGACGCAGCATGACCAAACCTATAGGTCCATACTCACTTGTTCGGGGAGGAAGCCTAATGGATGAAGGCATTGCATGCTATATTGGGCTCTCAAACTTGAAAGAAGCTACTGATAATTACGCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGATGGAAAAGAAGTGGCTGTTAAAATTATGAGTGATTCATGTACCCATGGGAACCATCAATTTGTGACTGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTAACCGTATTCTGGTTTATGAATATATGCACAATGGCACCTTGCGGGATCACATTCATGGTTCTACTAAGCAGAGAAACTTAGACTGGTTAGTTCGCCTTCGTATAGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACATACAGGATGCAATCCGAGTATCATACACCGAGACGTGAAGACCAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGATTAGCTGAAGAAGATTTAACTCATGTATCAAGTATTGCCAGGGGAACTGTAGGTTACTTGGATCCTGAGTACTATGCAACTCAGCAATTGACAGAGAAGAGTGACGTATACAGCTTTGGAGTTGTACTTCTTGAACTGATCGCCGGAAGAAAGCCTGTATCACCAGAAGATTACGGAGCCGAAATGAACATCGTACACTGGGCAAGGTCGTTGATTCGCAAAGGCGATGTGGTGAGCATAATGGATCCATGTTTAGTAGGGAACGTGAAAACGGAATCGATTTGGAGGGTTGCGGAAATAGCAATGCAATGCGTAGAACAACACGGGTCGTGCAGGCCGAGGATGCAAGAGATCATATTGGCTATGCAAGAAGCAATCAACATTGAGAAAGGAACAAACAGTAACATGAAATTATCATCCTCAGGTAGTTCGAAAGCTCAATCTACGAGAAAAACTTTACTCACAAGCTTTCTAGAAATTGAGAGCCCTGATTTGTCCAATGGTTGCCTCCCGACTGCAAGATAA 2790 0.4136 MGVFSLLIILIFYLLVSSAVCQVQEFISIDCGGTGNYTDKSTGLAWISDNGIMNHGTTVDVEGPNGNRIQYQKRRDFPIDNRKYCYTLSTDERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSSSIDVCLCCTTTGSPFISTLELRPLNLSMYATEFENDFFLKVAARINFGASSEDAIRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKNIEIGSREYPPVKVMQTAVVGTKGVLSYRTNLEDFPANARAYAYFAEIEDLGNNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVRTRDSTRGPLLNAMEISKYQLIAPKIDKHDLTVVNEFSSMSAESVQKNEGDPCVPTPWEWVNCSAATLPRITKINLSRRNVTGTIPSVINNMEELTELWLDGNLITGPLPDMSSLINLKIVHLENNKLSGPLPSYLGSLPSLEALFIQNNLFTGEIPPGLTSGKIIFNYDGNPGLHKGTKKHFKLILGISIGVLVILAILLLGSLMLMHNLRKASQQKSDENGISGRSMTKPIGPYSLVRGGSLMDEGIACYIGLSNLKEATDNYAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSCTHGNHQFVTEVALLSRIHHRNLVPLIGYCEEECNRILVYEYMHNGTLRDHIHGSTKQRNLDWLVRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSPEDYGAEMNIVHWARSLIRKGDVVSIMDPCLVGNVKTESIWRVAEIAMQCVEQHGSCRPRMQEIILAMQEAINIEKGTNSNMKLSSSGSSKAQSTRKTLLTSFLEIESPDLSNGCLPTAR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1323 929 FunFam serine/threonine-protein kinase PBS1-like 587 682 - -
Lele21g1323 929 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 407 500 - -
Lele21g1323 929 Pfam Malectin-like domain 29 362 IPR024788 -
Lele21g1323 929 PANTHER OS07G0107800 PROTEIN-RELATED 27 881 - -
Lele21g1323 929 SUPERFAMILY Protein kinase-like (PK-like) 598 875 IPR011009 -
Lele21g1323 929 Gene3D Phosphorylase Kinase; domain 1 592 682 - -
Lele21g1323 929 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1323 929 Gene3D Transferase(Phosphotransferase) domain 1 683 902 - -
Lele21g1323 929 Pfam Protein tyrosine and serine/threonine kinase 610 874 IPR001245 GO:0004672|GO:0006468
Lele21g1323 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Lele21g1323 929 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 683 890 - -
Lele21g1323 929 SUPERFAMILY L domain-like 398 505 - -
Lele21g1323 929 Gene3D Ribonuclease Inhibitor 372 516 IPR032675 -
Lele21g1323 929 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1323 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Lele21g1323 929 CDD STKc_IRAK 613 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1323 Lele-ChrLele21 21627719 21632667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1323 1 929 Receptor kinase-like Gene Family AT1G67720 68.026 0.0 1280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele21g1323 Malectin_like 1.3e-89 CL0202