Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1307 ATGGCCATTGAAGAGGAAATTAAGGAAGAGTTCCGAAGAAGCGGGTTTGACCTTGAAGATGAAGAAGAAGTACTAAACAAATGTCTCCCATTTTGCATAAACTACAGTCTCAAACCTTCCGATCTCGTTTCCAGTTGGGAGGTTTATTATCTGAACAGACTGCTGAATGGATCAACAGTTCAAAGTGCTGAAATCGATGGCTTTTTGGCGCACCTACAAAATGAGCAGAAAGAAGCTATTATCAAGGAGGAAACTGATATTCATATTTACTCAAGTAGAGATGTAGAAATGCTCTTAAATGATGATGATATTTCAAATGATAATGCTCCTGGAACTCCAACAGACCATCAACAAGTTCTATCACCTGCATATGATTCAACCTCTTTAACTAATGGGAGTGTTTTGTCATCTGGAAAATCATCAAAGCCTGCAACAGCATTTTCTAAGCGAACAAATAGGTTTGAGGTGAAGTTCAGCATCGATAACATGTCTAATCTAGAGAATGGAAAACAAGAACCTGGTCATGAGAATGATGAGGATGACATACTCAGAAAGGTTCATCCACGGCAAAGGTGTTCATTGGTGGTTCATGGATCAGGGCCCAAGCCAGGTTGTAGATTCATGTATGATAGGACTGAAGATAGGTTTAATGCATTAGAAAACCGAATTAAGAAACATACTAGGGTACATGTGGCTTCTGGACTCTATGAAGAACCAATGGACCCAACAATTGCTTCACAGAGAAGCATTTTCACTGTTGGCATGATTTGTTGTGAGGGAGAAGGGCGTCTAAATGAGAAATCTGTCATGCTGCAGAGCAGTGCTGAGAGCTCTGGAGGCCAACGGGTTCGCCTAGAGTTACAACAACTAAGCCATTTTTCAGTTTTCCCAGGCCAGGTAGTTGGTATTGAAGGGCATAATCCCAGTGGACATTGTTTAGTGGCATCCAAAATGGTAGATTCTATAGTTTCCTCTCTTGGTGACAGAGAGAATTTGAATCCAGCAAAGAAGCAAGCCTTTGATAAGGAAAATCATCCGACTGATCTGCCGCACAAGCAGAGGGAGTTATCAATGGTTATTGCAGCTGGCCCTTTTACCACCACAGACAATCTATTGTTTGAACCTCTTTCAGATCTACTGGCATATGCAAAGAAAAGACCACCACAATTGATTATATTGATGGGACCATTTATCGACACCGAACACCCAGACATTAAAAAGGGAACCACAGAAAGGACCTATGATGAAATATTTCGTATTGAAATCCTCAGAAGGTTGGAAGATTATGTAGAGTGTATGGGTTCCGCTGTACGTATTCTTCTTGTACCATCTGTACGGGATGCTAACCATGATTTTGTTTTCCCTCAGCCCGCATTAGATATCAATCTTCCTGATCTCAAGCCTCAGATAGCCAGTCTCACTAATCCGGGAATTTTTGAGGCAAATGAGGTCAAGGTTGGTTGCTGCACTGTGGATATCCTCAAGCAGCTCAGTGGGGAGGAAATATCACGAATTTCGGCAGATGCGAAGCCCAGTGATCGCATGAGTAGACTTGTAAACCATATTCTTAAGCAACAAAGCTTTTATCCTCTTTATCCACCGGCAGAAAGTGTTCCTTTGGACTATTCTCTTTCTCCAGAAGCTCTTCAAGTCCCATGGGTGCCAGATGTTCTCATTTTACCTTCAGACATCAAGTACTTTATAAAGGTTCTAAATGAAGAAAGTGAAGGGAACCACATGAAGTGCATTTCTGTCAATCCAGGAAGACTAGCCAAGGGAGAAGGAGGGGGTACTTTCGCCGAGCTCGATTTCTATGCGAGTGCCGACACAAGCAATGCTTCAATTGTTGGCATATAA 1857 0.42 MAIEEEIKEEFRRSGFDLEDEEEVLNKCLPFCINYSLKPSDLVSSWEVYYLNRLLNGSTVQSAEIDGFLAHLQNEQKEAIIKEETDIHIYSSRDVEMLLNDDDISNDNAPGTPTDHQQVLSPAYDSTSLTNGSVLSSGKSSKPATAFSKRTNRFEVKFSIDNMSNLENGKQEPGHENDEDDILRKVHPRQRCSLVVHGSGPKPGCRFMYDRTEDRFNALENRIKKHTRVHVASGLYEEPMDPTIASQRSIFTVGMICCEGEGRLNEKSVMLQSSAESSGGQRVRLELQQLSHFSVFPGQVVGIEGHNPSGHCLVASKMVDSIVSSLGDRENLNPAKKQAFDKENHPTDLPHKQRELSMVIAAGPFTTTDNLLFEPLSDLLAYAKKRPPQLIILMGPFIDTEHPDIKKGTTERTYDEIFRIEILRRLEDYVECMGSAVRILLVPSVRDANHDFVFPQPALDINLPDLKPQIASLTNPGIFEANEVKVGCCTVDILKQLSGEEISRISADAKPSDRMSRLVNHILKQQSFYPLYPPAESVPLDYSLSPEALQVPWVPDVLILPSDIKYFIKVLNEESEGNHMKCISVNPGRLAKGEGGGTFAELDFYASADTSNASIVGI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1307 618 MobiDBLite consensus disorder prediction 124 146 - -
Lele21g1307 618 PIRSF DNA_pol_alpha_2 1 615 IPR016722 -
Lele21g1307 618 FunFam DNA polymerase alpha subunit B 339 504 - -
Lele21g1307 618 Coils Coil 209 229 - -
Lele21g1307 618 FunFam DNA polymerase alpha subunit B 2 76 - -
Lele21g1307 618 Gene3D - 2 78 IPR043034 -
Lele21g1307 618 Gene3D - 338 505 - -
Lele21g1307 618 Gene3D - 506 615 - -
Lele21g1307 618 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 4 610 IPR016722 -
Lele21g1307 618 Pfam DNA polymerase alpha/epsilon subunit B 359 569 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1307 Lele-ChrLele21 21229462 21235126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1307 1 618 Core DNA Replication Machinery Family AT1G67630 58.199 0.0 755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1307 21 21229462 21235126 Lele23g0726 23 5809362 5820232 hybridization
Lele21g1307 21 21229462 21235126 Lele24g1228 24 16244374 16270756 hybridization