Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1304 ATGGATTCCGATTCAGACTCAGATGGTTCTCATGTTTCTGCTACGCCCCCAAGGGAAGAGCCTCCACCATCCTTGACGAAGCAACCGCCACCGCCACCGCGGCGGCCAAAACCTGTTCTCGTTTCCAACAAATTGAAATCTTCTCCCTCGTCCAGCAAGAAATCTTCAAAATCCAAATTACGCCCTTCAAAACCAGCAAAACCGTCGTCCAAACAGGAATCCATTCAAGAGGAATTTCCCCTTAAATCCTTTTGCCTTCCTACTCTACCCTTCCAAATTCGTAGAGCTTCTGATTGTGTCACCCAACTGTCAACTGCACAGTCCTTTGAAACCCTCCCAGCTGGGTACTTCTCCAAATCCGCGTCTTTCTCAAAAATTCGAAGGCCCTTCCTCAGTTTTACAGATTCACCTGGAAATGAACCTCCTCTTGATTTTGTATCCAATCCGGCCCTCAAGAACGAGAGTAATAAGAGTTCTTGTCAGCAGGGTGATTCTATTCCACTGGAAGTAGAGCGCGAAAGTCCAAAAGCTAGGAATGAGACAAAATTAGGGAAGAGACTTCCTAATCTGATAGGAGCTAATGTGCCGGCGCCATCTGTTAAGGTGCGAAAATGTGGTGATGAGGGAAATTTTGTGAGGTTGAATCTAAATAGTAAGAGGTGGAAGTCACGGAACCATGGGAAAAAGAAAAATTTTGCATATAGTAAACGCAGAAGGTACACGAGAAATAAAGTTAAATTGAAGCCTGAGGATCAGGATCAAATACAGTCGGTCTTTGAGTCTAAGGAGGATGCGTTTGTTGTGCAGACCGCACAAAAGAAGTCCAGGGATTCTCGTGGAACCAAAGGATTTGATTGCAAAGTGATTGAAGAGGTGGTTTCAGCAGTTCGAGATGACCCATCTGACGAGAATCTGGTGAAGTTGCTACGGTTAGTTTATGGCTATGATTCTTTTCGGGATTGTCAATTGGATGCAATCAAGATGGTACTTTCTGGAAAGTCGACTATGCTTATTTTGCCCACTGGTGCTGGTAAGTCCTTGTGTTATCAGTTACCTGCAATGATTTTACCTGGAATTACCCTGGTCGTCAGTCCATTGGTAGCCTTGATGATTGATCAACATAGAAAATTGCCTCCTATGATTAACGGAGGACTTCTATGCAGCAGTCAGGCACCTGAAGAAGCCTCTGAAACGCTGAAGCATCTTCAAGAAGGTGCATTAAAGGTGCTTTTTGTTTCACCAGAGAGGTTACTGAATGAAGAATTTTTGTCAGTAATTTCTACCGCTTCAACTGTATCTCTTGTTGTGGTTGATGAAGCCCATTGTATATCCGAATGGTCACACAATTTTCGCCCTTCATTCATGAGGCTTAGGGCATCTTTTCTCCACAACAAGCTAAATGCATGTTCTTTTCTGGCGATGACAGCAACTGCTACAACCATAACATTAAATTCCGTCATGTCTGCTTTAGGTATTCCTTGCACAAATCTTATTCAGAAGACAGAGTTAACAGACAATTTGCATTTATCGGTCTCTTTAGCAAGAAATAGAATGAAAGACTTATTGATGCTGATCAAGTCTCCTCCATATGTGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGTCTGAAACTGATATAATTAGCAAATACTTGAGTGACAACAATATCTCTGCGAAGAGTTATCATAGCAGTATCCCTGCAAAGGAGCGTAGCTATGTACAGGAGTTGTTTGGTTCCAACAAGATCAGGGTGGTTGTTGCAACTGTGGCATTTGGCATGGGATTAGACAAAAGGGATGTTGGAGCTGTAATTCATTACAGCCTGCCAGAAAGTCCTGAGCATTATGTTCAGGAGATTGGACGGGCTGGAAGGGATGGGAGGTTGTCCTTTTGCCACCTATTTTATGATGATGAGACATATGTCAAACTCCGTAGTCTAATGTACAGTGATGGAGTAGATGAATATGCAGTGAACAAGTTTCTCTGCGAAGTATTTCCTGCTCACGGGATTTCCAATGGCCAAATATGTGCCTTGGTCAAAGAATCTGCTTCACGGAGGCTTGACATGAAGGAAGAGGTGATGCTGACGCTTTTGACACGCTTGGAGCTGGGTGATGTGCAGTACTTGCGTTTACTTCCACAGATAAATACCACTTGCACTTTGAGTTTTCACAAGACTCCCCCTACAGTACTTGCCCAAAAGGACTCTGCTGTTGCTGCAATACTGGAAAGGTCTGAAAATAAGCAAGGGCTATATGTCTTTGACATGCCCTCTGTGGCTAATGACATAGGAGTTACAGTTGCTGAAATATCGAATCAGTTGCACAATCTAAAGTTGCTTGAAGAAATAACATTTGAGATGAAGGACTTGGCCTATTGCTATACGATTGTCAAAGCACCAACAGATTTTTTTGCGTTGTCAGCAAATCTTACGCGATGGTTATATGAGTTTGAAAGGTCAAAGGTACGGAAACTGGATGCGATGTATGATGCGGCATATTATGCAGTAAATATTTGTGACAAGAAACCAGGTTGCAATGGTTGCGATCACACACCATGCTTGCAAAGGAACATCTTAGATTACTTTGCTGGGGCCGATAATAATTCCTTGTCCAAGAAGTTGGATCAGAACAGTCCATTTTTGCGGGCAGATATAAAGGTCTTTATACAGAGTAATTCACAGGCCAAATTCACGCCAAGAGCCATTGCAAGGATAATGCACGGCATTGCAAGCCCAGCCTATCCTTCTGCTGCTTGGTCTAAAACTCATTTCTGGGGAAGATATAGGCAGGTAGACTTTCAGGTGGTGATGGAAGCAGCAAAGGAAGAACTCAAGAATTCTGTTGGAAAAGACAGCTCTAGTCATTCAAGATAA 2880 0.4292 MDSDSDSDGSHVSATPPREEPPPSLTKQPPPPPRRPKPVLVSNKLKSSPSSSKKSSKSKLRPSKPAKPSSKQESIQEEFPLKSFCLPTLPFQIRRASDCVTQLSTAQSFETLPAGYFSKSASFSKIRRPFLSFTDSPGNEPPLDFVSNPALKNESNKSSCQQGDSIPLEVERESPKARNETKLGKRLPNLIGANVPAPSVKVRKCGDEGNFVRLNLNSKRWKSRNHGKKKNFAYSKRRRYTRNKVKLKPEDQDQIQSVFESKEDAFVVQTAQKKSRDSRGTKGFDCKVIEEVVSAVRDDPSDENLVKLLRLVYGYDSFRDCQLDAIKMVLSGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALMIDQHRKLPPMINGGLLCSSQAPEEASETLKHLQEGALKVLFVSPERLLNEEFLSVISTASTVSLVVVDEAHCISEWSHNFRPSFMRLRASFLHNKLNACSFLAMTATATTITLNSVMSALGIPCTNLIQKTELTDNLHLSVSLARNRMKDLLMLIKSPPYVEVQSIIIYCKFQSETDIISKYLSDNNISAKSYHSSIPAKERSYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESPEHYVQEIGRAGRDGRLSFCHLFYDDETYVKLRSLMYSDGVDEYAVNKFLCEVFPAHGISNGQICALVKESASRRLDMKEEVMLTLLTRLELGDVQYLRLLPQINTTCTLSFHKTPPTVLAQKDSAVAAILERSENKQGLYVFDMPSVANDIGVTVAEISNQLHNLKLLEEITFEMKDLAYCYTIVKAPTDFFALSANLTRWLYEFERSKVRKLDAMYDAAYYAVNICDKKPGCNGCDHTPCLQRNILDYFAGADNNSLSKKLDQNSPFLRADIKVFIQSNSQAKFTPRAIARIMHGIASPAYPSAAWSKTHFWGRYRQVDFQVVMEAAKEELKNSVGKDSSSHSR 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1304 959 MobiDBLite consensus disorder prediction 1 77 - -
Lele21g1304 959 CDD DEXHc_RecQ4-like 306 499 - -
Lele21g1304 959 SMART ultradead3 314 510 IPR014001 -
Lele21g1304 959 Pfam Helicase conserved C-terminal domain 532 627 IPR001650 -
Lele21g1304 959 Gene3D - 505 694 IPR027417 -
Lele21g1304 959 Gene3D - 289 495 IPR027417 -
Lele21g1304 959 PANTHER DNA HELICASE RECQ FAMILY MEMBER 294 807 - -
Lele21g1304 959 MobiDBLite consensus disorder prediction 147 180 - -
Lele21g1304 959 Pfam DEAD/DEAH box helicase 320 479 IPR011545 GO:0003676|GO:0005524
Lele21g1304 959 MobiDBLite consensus disorder prediction 43 77 - -
Lele21g1304 959 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 517 675 IPR001650 -
Lele21g1304 959 SMART helicmild6 547 628 IPR001650 -
Lele21g1304 959 CDD SF2_C_RecQ 505 637 - -
Lele21g1304 959 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 308 653 IPR004589 GO:0004386|GO:0006310
Lele21g1304 959 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 433 442 IPR002464 -
Lele21g1304 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 646 IPR027417 -
Lele21g1304 959 FunFam ATP-dependent DNA helicase Q-like 5 504 695 - -
Lele21g1304 959 MobiDBLite consensus disorder prediction 149 165 - -
Lele21g1304 959 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 326 496 IPR014001 -
Lele21g1304 959 FunFam ATP-dependent DNA helicase Q4 286 496 - -
Lele21g1304 959 MobiDBLite consensus disorder prediction 16 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1304 Lele-ChrLele21 21206754 21216846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1304 313 660 Eukaryotic Initiation Factors Gene Family AT3G19760 23.562 4.44e-16 79.7