Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1291 ATGGCTAGGGCAGAAGTAGCGGCACAGGTGAAGTACTCCAGAGAACCTGACAATCCTACCAAGTCCTGCAAGGCCAGAGGCTCCGACCTTAGAGTTCATTTTAAGTTACATGCATCCATTAATCCCTTCTATGTTGCCATTTTAGTTGAGGATGTCTTTTCATCGAAGAAATCACGAAACACTAGGGAGACAGCGTTTGCCATCAGGAAGTTGCCCTTGGCAAAGGCAAAAAGGTACTTGGAAGATGTGTTAGCCCACAAACAGGCTATTCCCTTCAGAAGGTTCTGTGGCGGCGTTGGGAGGACAGCCCAGGCAAAGAACAGACATTCTAATGGACAAGGACGATGGCCCGTGAAGTCAGCTAAATTCATTCTTGATTTACTCAAGAATGCAGAAAGTAATGCTGAAGTGAAAGGCTTGGATGTAGACGCACTCTACATTTCTCACATCCAGGTTAATCAAGCACAAAAGCAAAGACGCAGAACCTACCGAGCTCATGGAAGAATCAACCCCTACATGTCGTCTCCATGCCACATAGAGTTGATACTATCTGAAAGGGAAGAGCCTGTGAGGAAGGAGCTGGAGTCCCAGTTGGCAACAAGCAAGAAAGCCTAA 615 0.4667 MARAEVAAQVKYSREPDNPTKSCKARGSDLRVHFKLHASINPFYVAILVEDVFSSKKSRNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEREEPVRKELESQLATSKKA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1291 204 Pfam Ribosomal protein L22p/L17e 59 184 IPR001063 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 ProSitePatterns Ribosomal protein L22 signature. 159 183 IPR018260 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 CDD Ribosomal_L22 23 183 IPR001063 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 TIGRFAM uL22_arch_euk: ribosomal protein uL22 58 185 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele21g1291 204 Gene3D Ribosomal protein L22/L17 54 204 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 SUPERFAMILY Ribosomal protein L22 58 185 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 Gene3D Ribosomal protein L22/L17 9 43 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele21g1291 204 PANTHER 60S RIBOSOMAL PROTEIN L17 10 203 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele21g1291 204 FunFam 60S ribosomal protein L17 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1291 Lele-ChrLele21 21002027 21004192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1291 10 203 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 76.804 7.57e-107 302