Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1288 ATGGCGGAAGAAGAGAAAGATAGCTCGATGCGACCAGAATTTCCGATTGGTCGAGTGAAAAAAATCATGAAGCTTGATCCCGAAGTCCAGAGGATAAGTTCAGAAGCCTTGTTCTTGGTATCATGCTCCACCGAGCTCTTCCTCCGATTCCTGGCTGAAAAGTCTGCCCAAGTTGCCATCGAGAAGAAGCGCAAGACTGTGAAGCTTGAACACTTAAGAATCGGCGTCAAGAGACACCAACCAACCAGCGATTTTCTGCTTGATTCGCTTCCTATGCCTTCTCGGCACGTTGATCGCCCCACCAAAGATCGGAGCCAATCTAGCCCTGATGCTGATAAGCTTCCTCTGCCAGGTACTCGCCGTATCGATCATTTCTTCCGAAAGCCAGAAGAAGCGCCAGAACCGAGAGATGAGTCTTAG 420 0.4952 MAEEEKDSSMRPEFPIGRVKKIMKLDPEVQRISSEALFLVSCSTELFLRFLAEKSAQVAIEKKRKTVKLEHLRIGVKRHQPTSDFLLDSLPMPSRHVDRPTKDRSQSSPDADKLPLPGTRRIDHFFRKPEEAPEPRDES 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1288 139 MobiDBLite consensus disorder prediction 95 109 - -
Lele21g1288 139 MobiDBLite consensus disorder prediction 116 139 - -
Lele21g1288 139 FunFam Nuclear factor Y, subunit C13 1 91 - -
Lele21g1288 139 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Lele21g1288 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 74 IPR003958 -
Lele21g1288 139 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 97 - -
Lele21g1288 139 SUPERFAMILY Histone-fold 11 93 IPR009072 GO:0046982
Lele21g1288 139 MobiDBLite consensus disorder prediction 83 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1288 Lele-ChrLele21 20962362 20962781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1288 4 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 63.780 1.58e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele21g1288 CBFD_NFYB_HMF 9.3e-20 CL0012