Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1274 ATGGACTGGAATGCAAATTCTTTCTCTCAGTGGGACTGGGAACAACTTTTTAACACAAAAGCAACTGAGAATCCTAGGTTAAAGCCGGTGGATTGGAGTGGCAAAGCAGATGGAGAAGTCAATGTTGGGCTGTTCAATCCATCTTGTGGTATTAATAGTTCTGGGTCTGAGCTACAGCATGTTTATTCATCAAGGCGCTCAAAATCAGCCTCCATGAATTCTTCATCAAATGGGTATAGCAGAACATCGGTGCTCACTTTTGAAGGCTCCCAAGAAGATACTAATGGTAAGAAAGAGAGGTCAAAAGAAGAGCCTGTTGGAAATTCTCTCACACTAGAACATTCTTCTGTCTCTGGTGAACCATTGCACAGTCTAAAGCTCGGCAAACGGCTGTACTTTGAAGATGTCTGTGATGGAAGTGATACAAAGAACACATCTCACTCTGGAATTCCGGTGCCATCTTTGAGTACTGGGAAAAAATGCAAGTCAAATAGTCAGAGCTCACAACCTCCACACTGCCAGGTTGAAGGCTGTAACCTTGACCTATCATCAGCTAAAGATTACCATCGCAAGCATAGAGTTTGTGAAAGTCATTCTAAATCCCCTAATGTTGTTGTAGATGGTAAGGAGCGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTCTCAGAGTTTGATGGGAAAAAAAGAAGTTGCCGGCATCGTCTTTCTGATCATAATGCTAGGCGTCAGAAGCCTCATTCTGAAGCTGTCCAGTTGAATGCATCATTTTTGCCCTCATCACCGTACGATGGGAGGCAACAGATGAGCCCATTTCCTAACTCAAGGACTGCTATCAACTTCGTTTGGCGGGATACATACAGCAGCAGGATCTCCCAAACGAAAGAATTTCTCATGAAACCTGCAAAAGTAGGAGGTACCATTGGGCAGGTGCAACAACCCTTCAATGAGATCCCAAGTACCTCTTCTAAGACTTCTAAAGGTTCCGGTGGCCTTTGCACATCCAAAGCCATGCCAACAAAGACAATAAATCCAGGGAAGGAAGATTTCATTACCTCATCAGATCCGAACGCTCTACAAGATTTTCACCATGCTCTCTCTCTTCTGTCAACCACCACTTCTTGTGGTCCATACGAGGCAAAGTTTGCTTCTGAAGAGCACTCCAATCGCTGA 1176 0.4439 MDWNANSFSQWDWEQLFNTKATENPRLKPVDWSGKADGEVNVGLFNPSCGINSSGSELQHVYSSRRSKSASMNSSSNGYSRTSVLTFEGSQEDTNGKKERSKEEPVGNSLTLEHSSVSGEPLHSLKLGKRLYFEDVCDGSDTKNTSHSGIPVPSLSTGKKCKSNSQSSQPPHCQVEGCNLDLSSAKDYHRKHRVCESHSKSPNVVVDGKERRFCQQCSRFHGLSEFDGKKRSCRHRLSDHNARRQKPHSEAVQLNASFLPSSPYDGRQQMSPFPNSRTAINFVWRDTYSSRISQTKEFLMKPAKVGGTIGQVQQPFNEIPSTSSKTSKGSGGLCTSKAMPTKTINPGKEDFITSSDPNALQDFHHALSLLSTTTSCGPYEAKFASEEHSNR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1274 391 ProSiteProfiles Zinc finger SBP-type profile. 170 247 IPR004333 GO:0003677
Lele21g1274 391 MobiDBLite consensus disorder prediction 62 91 - -
Lele21g1274 391 FunFam Squamosa promoter-binding-like protein 14 164 234 - -
Lele21g1274 391 Pfam SBP domain 173 246 IPR004333 GO:0003677
Lele21g1274 391 MobiDBLite consensus disorder prediction 141 173 - -
Lele21g1274 391 MobiDBLite consensus disorder prediction 62 121 - -
Lele21g1274 391 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 70 300 IPR044817 GO:0003677
Lele21g1274 391 MobiDBLite consensus disorder prediction 314 356 - -
Lele21g1274 391 MobiDBLite consensus disorder prediction 92 107 - -
Lele21g1274 391 Gene3D - 163 234 IPR036893 GO:0003677|GO:0005634
Lele21g1274 391 SUPERFAMILY SBT domain 171 251 IPR036893 GO:0003677|GO:0005634
Lele21g1274 391 MobiDBLite consensus disorder prediction 142 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1274 Lele-ChrLele21 20661008 20663424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1274 1 375 SBP-box Gene Family AT5G43270 41.406 1.55e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele21g1274 SBP 1.5e-31 No_clan