Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1265 ATGTACGTTTTACAGAATCATGAACAGTATCAGATTACTCAAGAGAACCCTCAACAGCCACCCAGTAACATTCATATTCTCTCTCTGATTGATAAAAATATATTACATCTTTTACTACTTCTGATTGTAACTGGATCACACATTTCTGGTCATGGTCATAATTGGAGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTGCAGTCAGTTGGAAATGTTGAGGCATTAAATTGTTATTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGCTGCAGTGTTTTGAATTCTCATCCTTTACATATCTCATATATGCTGTTTTCCAGTTCCAAAACCCTTTATCAATTTTACCAGACATTAGACGAAGATCCCACGTCTTGGCAAGGCGACTCTGCGTTATTTCTATTTTATCTAGCCTTGGAAGGTCCAATTCTGGCCATGTCACACAACAATCACCAGGATCCTCATCTACATTTAATCAGAGTCTTAGCTCATACACTACCCTGAAGGTAGGGTCAACATCCGTGTTTGGTGATTCATATGACCCTAATCAGAGTTTCTCCAGTCCTGGATCGGTAGAATTCACATCTGATACAGTCATCAAGAATAATGGAATAGATAACTTGGATGGAATAGAGGCAGAGTCAGGAAATTCACCTGAACTTGAGGTTACTCAAGCCTTGCGCCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTCAGAGAAATTGATTCCTTCAGCAGCGAGCAGGAGCACACACATGATTCTAGTCCCCAACAAAATACAATGGCAATCAACAGTCAAGATATTACTGCAGCTTGGCCTGCACTGAGTGATCACGGCCAATCTTATGATGGACATGTTGCCAGACAAGGTTATGTTGATAAACTAGTGCTTTTGAGATATGTTTTAATTTGTGGCCACTTAATAGGGTTTGGATCTTTAAAAATTGTTAAAAAGCCCTCAAGCACCTGCCAAGGTAGCCTCCCTATGATTCTCCTCAATCTGCCCTCAGCTTCCAGCTTATTGCCCTGGGTTTCTTGGGCTCAGCTTGCCCTTCTTTCTAGCATGACAGTGGTGAATATTTTCATGAAATTACCAGACCATAATTGCTCTGGTGGAAGTGGAACTGAGAAGACTTTATACTGGAAGGAGATGCTGGATTCATGCAAGCCCTTGTCCTCGGCTAATTTGCAAGAGAAACACGTGTTCAAACCTGCTGGAAATGGAAACTCACTTTCTTCTTCGGGAAGGTTACCAATTGCCAACCTGGAAAGCAGTCACTGGATCAGCTTTGGCCGTAACAATGCTGAAAGCTCTTCCTTGCCATTGACTCAAGACACTCATGGAGTCAGATTTTCTCCATATTCTTCTATAGAAACTCAAGAAGCTCATTTGGACTGTTATGCATCATATTTTGACCAAGACCAAATTGAAGCTCCTCTGGATTTAGATTTAGGTTTGACTGTTGCACAAAAGCAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACGAAGGTTATCATTGTTGGATCATTTCTCTGTCATCCCACGAGTTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTCACTCTCTGCATTACATATGGGAATCGAGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGCTGCCCCCACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCACAGATGATTTTTTCTGATTCTTCCCCGATGGAATCTGGAAATTATGAACTGGGAAAACGGAAATTTGATGATGATTCCTGGAGCCATGTTGTTGAGGCTATTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTTTAAAGGATAGGTTGCAGTTGTGGCTTTCTTCCAGATCCCACAAAATAAATGATGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACATATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAATGGATGGACTGCCCTGCATTGGGCTGCACGATTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCGGCTGGGGCAGTGACAGATCCAACTAACCAAGATCCAACTGGTAAAACGGCTGCTTCTATTGCAGCCAACAGTGGGCATAAGGGTTTGGCAGGTTATCTTTCAGAAGTATCTCTAACGAGCCATTTATCTTCTCTCACCCTGGAAGAAAGCGAGCTGTCTAAAGGTTCTGCTTTGCTTGAAGCAGAGTTAGCTGTTAGTACTGTCTCCAGTGAGCATCTAACAGCCGGAGAAGATCAGATTTCACTCAAACATACCTTGGCTGCTGTGCGTAATGCAGCTCAGGCAGCTGCACGTATACAGGCTGCTTTTCGTGCACGTTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCCATTTCTGCAGCAGGTATAGATCGATATGATTTCAGTGATAACATTCCAGAGCTTTCTGCCATGTCAAAACTTACCTCTCATGATTCACGTTATTACAATTCAGCCGCCATATCAATTCAGAAGAAATATCGGGGATGGAAAGGCCGCAAAGATTTTTTGGCATTACGTAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAGGATAATATGTTGGGTTGTTGGGTTCTTTGACAAGGCTGTGCTCCGGTGGAGAAGGAGAGGAGCTGGTTTACGAGGTTTTAGACAGGAGAGAAACTCAATTGATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGACGCAGTTGAACAGGCTGTTTCACGGGTTCTGTCCATGGTTGATTCTCCCAATGCTCGTCAACAATATCATCGTATGCTTGAAAAGTTTCGTCAAGCCAAGGCTGAACTCGGCAGCACGAGTCAAGGAGTACCGTTATCTTTTCTGAAGGATGCTTCCAATATGGAAGATGATGACTTAAATCAGTTTTCCTAG 3261 0.4281 MYVLQNHEQYQITQENPQQPPSNIHILSLIDKNILHLLLLLIVTGSHISGHGHNWRKKKDGRTVGEAHERLKVQSVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSELQCFEFSSFTYLIYAVFQFQNPLSILPDIRRRSHVLARRLCVISILSSLGRSNSGHVTQQSPGSSSTFNQSLSSYTTLKVGSTSVFGDSYDPNQSFSSPGSVEFTSDTVIKNNGIDNLDGIEAESGNSPELEVTQALRRLEEQLSLNEDSFREIDSFSSEQEHTHDSSPQQNTMAINSQDITAAWPALSDHGQSYDGHVARQGYVDKLVLLRYVLICGHLIGFGSLKIVKKPSSTCQGSLPMILLNLPSASSLLPWVSWAQLALLSSMTVVNIFMKLPDHNCSGGSGTEKTLYWKEMLDSCKPLSSANLQEKHVFKPAGNGNSLSSSGRLPIANLESSHWISFGRNNAESSSLPLTQDTHGVRFSPYSSIETQEAHLDCYASYFDQDQIEAPLDLDLGLTVAQKQFTIKEVSPEWGYATEATKVIIVGSFLCHPTSSTWACMFGDVEVPVEIIQDGVIRCEAPSHLPGKVTLCITYGNRESCSEVREFEYRNKDSCPHCNSLETESTRSPEELLLLVRFAQMIFSDSSPMESGNYELGKRKFDDDSWSHVVEAILVGSGTSSGTVDWLLEELLKDRLQLWLSSRSHKINDETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTNQDPTGKTAASIAANSGHKGLAGYLSEVSLTSHLSSLTLEESELSKGSALLEAELAVSTVSSEHLTAGEDQISLKHTLAAVRNAAQAAARIQAAFRARSFRKRREREAAISAAGIDRYDFSDNIPELSAMSKLTSHDSRYYNSAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYRIICWVVGFFDKAVLRWRRRGAGLRGFRQERNSIDENEDEDILKVFRKQKVDDAVEQAVSRVLSMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPLSFLKDASNMEDDDLNQFS 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1265 1086 Pfam IPT/TIG domain 527 610 IPR002909 -
Lele21g1265 1086 ProSiteProfiles Ankyrin repeat profile. 752 784 IPR002110 GO:0005515
Lele21g1265 1086 ProSiteProfiles Ankyrin repeat region circular profile. 752 778 - -
Lele21g1265 1086 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Lele21g1265 1086 FunFam Calmodulin-binding transcription activator 2 926 974 - -
Lele21g1265 1086 Gene3D - 675 817 IPR036770 -
Lele21g1265 1086 Gene3D Immunoglobulins 521 615 IPR013783 -
Lele21g1265 1086 SMART ANK_2a 791 820 IPR002110 GO:0005515
Lele21g1265 1086 SMART ANK_2a 752 781 IPR002110 GO:0005515
Lele21g1265 1086 FunFam Calmodulin-binding transcription activator 2 521 615 - -
Lele21g1265 1086 FunFam Calmodulin-binding transcription activator 4 isoform A 634 817 - -
Lele21g1265 1086 SMART iq_5 949 971 IPR000048 GO:0005515
Lele21g1265 1086 SMART iq_5 926 948 IPR000048 GO:0005515
Lele21g1265 1086 SMART iq_5 869 891 IPR000048 GO:0005515
Lele21g1265 1086 Pfam CG-1 domain 3 117 IPR005559 GO:0003677
Lele21g1265 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 920 976 IPR027417 -
Lele21g1265 1086 CDD IPT 527 611 - -
Lele21g1265 1086 SUPERFAMILY Ankyrin repeat 721 813 IPR036770 -
Lele21g1265 1086 ProSiteProfiles IQ motif profile. 950 974 IPR000048 GO:0005515
Lele21g1265 1086 SUPERFAMILY E set domains 527 611 IPR014756 -
Lele21g1265 1086 Gene3D - 927 973 - -
Lele21g1265 1086 ProSiteProfiles IQ motif profile. 927 956 IPR000048 GO:0005515
Lele21g1265 1086 Pfam IQ calmodulin-binding motif 951 971 IPR000048 GO:0005515
Lele21g1265 1086 Pfam IQ calmodulin-binding motif 929 947 IPR000048 GO:0005515
Lele21g1265 1086 SMART CG_1_2 1 119 IPR005559 GO:0003677
Lele21g1265 1086 Pfam Ankyrin repeats (3 copies) 734 812 IPR002110 GO:0005515
Lele21g1265 1086 ProSiteProfiles CG-1 DNA-binding domain profile. 1 124 IPR005559 GO:0003677
Lele21g1265 1086 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1265 Lele-ChrLele21 20469597 20489956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1265 1 275 CAMTA Transcription Factor Family AT1G67310 36.957 1.17e-35 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele21g1265 CG-1 1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1265 21 20469597 20489956 Lele23g0772 23 6642847 6665830 hybridization