Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1259 ATGGGAATGGAACATTTGCAGTGGTCATCAACGTCTGGATCACTGAAGAGAAGCAGAACACCTAGCAGTGGAATCCAAGTTGCTTCATGTTTGGTTGATGGATGCAATTCAGACCTTAGTAAATGCAGAGACTATCACAGACGCCACAAGGTTTGTGAACTTCACTCTAAGACCCCTAAGGTCACAGTCAGGGGTCAGGAACAACGCTTCTGCCAGCAGTGTAGCAGGTTCCATTCATTGGAGGAGTTTGATGAAGGAAAGCGAAGCTGCAGGAAACGTCTTGATGGGCACAACCGACGCCGGAGAAAGCCTCAACTGGAACCCCTGCCAATGACCCCAGCAAGATTTCTTGCTGAGTACCCAGGTACCAGAATCTCAGCATTCAACAATCCACAAATACTCCCAACAGGTCCTAGTTTGAGCAGTGCTTGGGGTGGGCCTATTAAAGCTGAGAATGATTATGTTTCCTTCAAGCTTGATAATGGCAGAAATGGGCCAATTGGTGAAACTCTTAGTGAGCAAGGACGACAGGGACAGAGACAAATTTCATGTCTTCAAGGCCCCAAATCCTCACTCTATGGATATTCTGCCAGTGAACTGAACTTAAATTCCAACTTCACATCAGAAAATGCAGGCAACAACAATCACAACAATAAGAACAACCAGAAAGCATTCTCATATTGTGTTCGCTCTCTTCTGTCATCGACACAACCACCTGAGACTCATGAGGTTGGATATGAAATCCCTCAAGCTTTGAACATGAATGCTTCAGAAATGGTGAGCCATGGCCATAATAATACTAGTAATTGTGAGGGGATGATGTTTAGTATTGGATCTGATGGGTCTTCTTCATGTGGTTCTTCCCATAAACTCTTCATGTGGGAGTAA 888 0.4482 MGMEHLQWSSTSGSLKRSRTPSSGIQVASCLVDGCNSDLSKCRDYHRRHKVCELHSKTPKVTVRGQEQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQLEPLPMTPARFLAEYPGTRISAFNNPQILPTGPSLSSAWGGPIKAENDYVSFKLDNGRNGPIGETLSEQGRQGQRQISCLQGPKSSLYGYSASELNLNSNFTSENAGNNNHNNKNNQKAFSYCVRSLLSSTQPPETHEVGYEIPQALNMNASEMVSHGHNNTSNCEGMMFSIGSDGSSSCGSSHKLFMWE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1259 295 FunFam Squamosa promoter-binding-like protein 14 21 91 - -
Lele21g1259 295 ProSiteProfiles Zinc finger SBP-type profile. 27 104 IPR004333 GO:0003677
Lele21g1259 295 MobiDBLite consensus disorder prediction 1 21 - -
Lele21g1259 295 Pfam SBP domain 30 103 IPR004333 GO:0003677
Lele21g1259 295 Gene3D - 21 91 IPR036893 GO:0003677|GO:0005634
Lele21g1259 295 SUPERFAMILY SBT domain 28 108 IPR036893 GO:0003677|GO:0005634
Lele21g1259 295 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 11 276 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1259 Lele-ChrLele21 20408652 20410081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1259 26 145 SBP-box Gene Family AT5G50670 61.983 1.54e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele21g1259 SBP 8e-31 No_clan