Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1252 ATGGAATCGAAGAAGGGAAAAGGGAAGAAAAATCTGATCATCAAGACATGGGAGCGATGCAAGTCCATGGGACGTGGCGGCGGCGGTGGTGACGGCAAGAACAAACGATACAAGGCGATTGAATCGGTGGTTGTGGGTCTGAGAAGCAGAAGCAAATCCTGCCCTAACCTTAACCTCAAGGTGTTCGAAGAAAAGCCAGTGAACAAGAAATCGCGTCAGGTTGCTCCACACGGTTGCTTCTCCGTCTACGTGGGGCCTCAGAGGCAGAGATTTGTGATCAAAACAGAGTTTGCAAACCACCCTCTTTTCAATATCTTGTTGGAAGAAGCAGAATCAGAGTATGGATATAACAGCAAAGGCCCCTTAATCCTTCCCTGCGATGTTCATATATTCCTTAAGGTACTCATGGAAATGGACCAAGAAACTGATGAAGATAATCAAATCCGTCATGGCTGTGCTTTTTTGAAGCGTTCTGCCTCATATCACTTTCTAACTCCATCTCGAATGCTAGCCATAAATCCCTTCTGA 528 0.4602 MESKKGKGKKNLIIKTWERCKSMGRGGGGGDGKNKRYKAIESVVVGLRSRSKSCPNLNLKVFEEKPVNKKSRQVAPHGCFSVYVGPQRQRFVIKTEFANHPLFNILLEEAESEYGYNSKGPLILPCDVHIFLKVLMEMDQETDEDNQIRHGCAFLKRSASYHFLTPSRMLAINPF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1252 175 Pfam Auxin responsive protein 53 135 IPR003676 GO:0009733
Lele21g1252 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1252 Lele-ChrLele21 18783762 18784289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1252 13 135 Calmodulin-binding Proteins AT3G43120 34.127 1.10e-17 74.3