Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1246 ATGGCAGATCCCAAAGCAGTAGAAATCAAGGATTTCCAGATTATGATCGCAAACAAAGACGACGATGATCAGAAACAGTCAGGATCAGTAAAAAAGAAAGCTCCAAGAAAGGATCGTCACAAAAAGGTTAATGGCAGAGGAAGAAGAATAAGGATGCCTGCTCTGTGCGCCGCTAGGGTTTTTCAGTTAACCAGAGAACTGGGTCACAAGTCCGACGGCGAGACGATTCAGTGGCTTCTTCAACAAGCGGAACCCTCCATCGTCGCCACCACAGGTAGCGGCACAATCCCAGCTTCCGATCTAGCAGAAGTAGGGTCCTCTGTTTCTGGTCAGAGAAGCTCTGTTTCAAGTGGTTTGCATGCAAAGGTGGAATCTTTAGGGCCAAACTGGAAAAAAATCAATGGAAATTTGGGAAGAACACAACCAGTCATCAATGGAGTTTGGCAAGCTATAACTGGAATCAGCCCAGGAATTGTACAAAACTGTGGTTATTTGAGTTCAAGTTCTGGGTTTGAATTTGCTCGAATGAATTCGTCAGGTTTCATGGAAGCTCCACCAGCAGAGCATCAAGCTCCAGGTTTAGAACTGGGTCTTTCACAGGATGGTAATATTAGGGTTTTATCATCAGAAGCCATGGCTCAGTTTTATCAGCAATTAGGTCAAGGTCGTGAAGTTGCAGGGTCATTGGAACACACCCAGAAGGATCATCATATTCAGAGATCAAAACAGTGA 732 0.4481 MADPKAVEIKDFQIMIANKDDDDQKQSGSVKKKAPRKDRHKKVNGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIVATTGSGTIPASDLAEVGSSVSGQRSSVSSGLHAKVESLGPNWKKINGNLGRTQPVINGVWQAITGISPGIVQNCGYLSSSSGFEFARMNSSGFMEAPPAEHQAPGLELGLSQDGNIRVLSSEAMAQFYQQLGQGREVAGSLEHTQKDHHIQRSKQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1246 243 MobiDBLite consensus disorder prediction 17 49 - -
Lele21g1246 243 Pfam TCP family transcription factor 35 120 IPR017887 -
Lele21g1246 243 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
Lele21g1246 243 MobiDBLite consensus disorder prediction 32 48 - -
Lele21g1246 243 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 121 IPR005333 GO:0003700
Lele21g1246 243 MobiDBLite consensus disorder prediction 17 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1246 Lele-ChrLele21 18520815 18521546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1246 6 216 TCP Transcription Factor Family AT3G27010 46.552 3.75e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele21g1246 TCP 4.6e-29 No_clan