Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1241 ATGGTTGGTCCCAAATCGCAGAGCCCCGAAAGCGTTCCTTGCGATTTCTGTACACAACAAACAGCTGTTCTGTATTGCAGAGCTGACTCTGCCAGGCTCTGTTTGTTCTGCGATCAACACGTTCATTCCGCTAACTTGCTCTCTCGCAAGCACTTGCGCTCTCAGATCTGCGATAATTGCACTTCCGAGCCCGTCTCCGTCCGATGTAACACCGACAACCTTGTTCTCTGCCAAGACTGCGATTGGGATGCTCACGCCTCCAGCTCCGTTGCCGCCTCTCACCACCGTACCCCTGTTGAGGGTTTCATTGGGTGTCCCTCTGCATCTGAACTCGCTTCGCTTTTGGGATTTCATTTTGATAATAAGACTTTAGATCAATCTCCTTCTTCTTCTTTGATTCAAAACTCGGGTGATTATCGGGATTTGTTTGTGCCACTTGAGTCCTGCCTGTTTAAATCCGATGGCGTTCCTCTTCAAGTTCATGACCTCATGGTGCCCAGAGAAACCGGTATGGTTTACCCGTCTCGGGATTTCCAGGCGGTTTGTAACACTACAAAGAAACAGACTCCGTGCTGTGGGAAGCAGAAACAGGTTATACATAAGCAGCTGGTTGAATTGCTCAAGAGGGATTCGGTGGTTATTGATGTTGGTGGCGGAGGCGGTGATGTTAACTGTGATCGTGGTGCTATTTTAACTCGGATAAGTACTGCTAATGAGGCTGAGAATTTGGTTCCGGAAGCGCCGAGAAAGAGCCAGGGAGATGGGCAACCATTTGTTTTGGGAAATGAGATTAAGGGATTACCGGCGATTACTGCTTCTCAGCAACCATTGCAGCAACAAGCACCAGTCAATTCTCCGTTTATGATCCCTTCGCAGTTGCATCATAATGAAGGCGATCGATTGTGGCACAATAATTCCAACAGGCACTCTGTTCAGATATGGGATTTCCATTCTGGACGACTAAGGGATCAAGAAGAATCAAGTGCACTTGAAGCTGCCTATGTAGCAAGTGATGGCGGATTTGTGGCTAAGAACTTTAGTGAACTTATCAGAGAATCATCCATGTCCGACGCAAAATTGTTGCGAGATATATATGATATGGATATCGCGTACAATGATATGGCATCATATAACAACATGTCAAATAACCCAACAACAAGTCAGGGCCCTGCAGCAACATTAGAGAGCAACAACCTACCAACAAGAAAGCAATCTGGGCACAAAGGTAACTGCAGTGTCAAAGAGACACAGATTGGGGAACATCCTTTGCTTGTTACAGGTGACAACATGGGAAAAGCAGGACGAAGTAAGGCTGACATGGACCTGTTGGCCCAAAACAGGGGCACTGCAATGCTCCGTTACAAGGAGAAAAAGAAAACTCGAAGGTACGAGAAGCACATAAGATATGAATCTAGGAAGATGAGGGCTGATACTCGCAAACGAGTCAAAGGCCGATTTGTGAAGGCTAGTGACGTGGTCGCACCTCCTAATGGTTAA 1497 0.4689 MVGPKSQSPESVPCDFCTQQTAVLYCRADSARLCLFCDQHVHSANLLSRKHLRSQICDNCTSEPVSVRCNTDNLVLCQDCDWDAHASSSVAASHHRTPVEGFIGCPSASELASLLGFHFDNKTLDQSPSSSLIQNSGDYRDLFVPLESCLFKSDGVPLQVHDLMVPRETGMVYPSRDFQAVCNTTKKQTPCCGKQKQVIHKQLVELLKRDSVVIDVGGGGGDVNCDRGAILTRISTANEAENLVPEAPRKSQGDGQPFVLGNEIKGLPAITASQQPLQQQAPVNSPFMIPSQLHHNEGDRLWHNNSNRHSVQIWDFHSGRLRDQEESSALEAAYVASDGGFVAKNFSELIRESSMSDAKLLRDIYDMDIAYNDMASYNNMSNNPTTSQGPAATLESNNLPTRKQSGHKGNCSVKETQIGEHPLLVTGDNMGKAGRSKADMDLLAQNRGTAMLRYKEKKKTRRYEKHIRYESRKMRADTRKRVKGRFVKASDVVAPPNG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1241 498 CDD Bbox1_BBX-like 13 56 - -
Lele21g1241 498 ProSiteProfiles CCT domain profile. 447 489 IPR010402 GO:0005515
Lele21g1241 498 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Lele21g1241 498 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Lele21g1241 498 Pfam CCT motif 447 489 IPR010402 GO:0005515
Lele21g1241 498 MobiDBLite consensus disorder prediction 380 412 - -
Lele21g1241 498 SMART bboxneu5 9 56 IPR000315 GO:0008270
Lele21g1241 498 SMART bboxneu5 57 99 IPR000315 GO:0008270
Lele21g1241 498 Pfam B-box zinc finger 55 97 IPR000315 GO:0008270
Lele21g1241 498 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1241 Lele-ChrLele21 17543973 17547263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1241 8 495 C2C2-CO-like Transcription Factor Family AT1G28050 39.271 7.44e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele21g1241 CCT 1.8e-15 CL0281