Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1235 ATGATGGAGAAGGAGAAGAAGATGAGTTTTGTGAGAAATGGTGAACTTCGATTACCTCCTGGATTTCGATTTCATCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGCGAAAGGTCTTCTCTTATCCCTTGCCTGCTTCAATCATCCCTGAAGTTCATGTCTGCAAATCAGATCCTTGGGACCTGCCAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACTAGAGAAGCTAAATACTCCAATGGAAGCCGATCCAACAGAGCAACGCATTCTGGATATTGGAAAGCCACTGGTTTAGACAAGCAAATTCTGAGTTCTAAGGGAAATCAAATCGTCGGCATGAAGAAAACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGTTCTAGAACCGATTGGATCATGCACGAATATCGCCTTCATAATATACAGAGCTCTGTGGTGGGGATGCAGAACTGGGTTTTGTGTCGGATGTTCTTGAAGAGAAGAAGCACGAGTGGGAAGAGTGAGGAACAGATTAGTTTCAGAGTGAGGAGGGAGATGAACAGTCACAACAAGGTGATGATGATGAACAAGACAAGGCCTGTGTTTTATGATTTCTTAGCACAGAGCTACAAGAACAATAACAATAATACAACTGATTTGAATCGCACTCCTAATACGACGTCGTCGACTTCAAGCATAAGCGTAATAACACATCTCTCCTCGCAACACGAATCTGATGAGCGTGAAGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTACAGGAAACCCGTGA 786 0.4364 MMEKEKKMSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVFSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILSSKGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSVVGMQNWVLCRMFLKRRSTSGKSEEQISFRVRREMNSHNKVMMMNKTRPVFYDFLAQSYKNNNNNTTDLNRTPNTTSSTSSISVITHLSSQHESDEREESSSCNSLPSLTGNP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1235 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 234 - -
Lele21g1235 261 MobiDBLite consensus disorder prediction 211 237 - -
Lele21g1235 261 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Lele21g1235 261 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Lele21g1235 261 MobiDBLite consensus disorder prediction 211 261 - -
Lele21g1235 261 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Lele21g1235 261 SUPERFAMILY NAC domain 7 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1235 Lele-ChrLele21 17277657 17278616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1235 8 254 NAC Transcription Factor Family AT5G13180 58.755 5.49e-100 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele21g1235 NAM 6.4e-36 No_clan