Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1232 ATGTATGGACATTTGTGGATTATACTTTTGATGTTGGGTGACCAATTGTCCAGAAGTTTATGTTGTTCAGACAAGACCCAACTACCAAGCTTGTCATCATTAATGCTTACTAATAATCAGAACTTTGGACTTGATTCCGGCTACTACGTTACCTTTTTTTTTGGTTGGCCATTCATTCTTTCTGATATTCTTGTGCATGAAGTAACCTTTTCCAAGATTTATGTGGATAGTAAGAATTTTTATCCTTTAAATATGTGGTTGGAGATTCAATTATTGACCTTTGTGTATGGAACAACGATCAGGACTTTGATTATCCTGGCAGCAAATAACACAGAGCAGCAATTGTCACTGGGCCCGAATCCGAATACCGTTGACGGCCAAACAGACGGAACCACTAACGGCGTTAATGTCCGGCCGCCGTCCACCGACGGCGGAGAAGATGGCATCAAAGCCCCGAGGCTGCCTCGTTGGACGAGACAGGAGATTCTGGTGCTGATACATGGGAAGAGGGACGCGGAGAACCAAATTCGAGGGAGTCGTAGTGCGGGATTGCCATTCGGGACGGGTCAGCTGGAGCCGAAATGGGCTTCGGTCTCATCGTACTGCAAGAAGCATGGGGTGAATAGAGGGCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGATTATAAGAAGATCAAAGAATGGGAATCTCAGATAAGGGACGATTCGGAATCGTTCTGGGTGATGAGAAATGATTTAAGGAGAGAGAAGAAGTTGCCGGGATTTTTCGATAAGGAGGTCTATGACATTCTCGATTCAGGATCGCAGGCGCCGGCGTTATCTTTAGCTCTGGCACCGGCTTCCGCAACGGGAACTGTTCCGGGGGAGAAGGGGAAAGACAGCAGGGGAGTGGCGGCGGAGGAAGCGGAGGCTGATGCAGAGCCACACTTGTATGATAGTCGGAGCGCGGCCGGAGAGGATGGCTTGTTCTCGGATTTCGAACAGGAAGAGGCAGGAGTGAGTCCAGTAAAGGAAGCGGCAAGGAAGGATGTCTTAACACATACGACGCCTGTTCCTGCGCCTATTCCCATCTCAGAGAAGCAATATCAACCACTCCTGCGGAGCGGTCAAGGTGAAGGAAATGCTCAAGGTGGGAGCAACGAGAAACAGCGAGGCCCAAATCCAGAAATGGGTTCTACGTCTCAAGGAGGACGGAAGAGGAAACGGTTTCCAACAACGGATGAGGAGGATGAAATTCTGCAAAATCAATTGATCGATGTGTTGGAGAGAAATGGGAAGATGCTGAGCACCCAGCTTGAAGCTCAAAACATAAATTTCCAGTTGGATAGGGAACAGCGGAAAGACCATGCTAGTCACTTGGTTGCTGTTCTTGATAAGCTTGCAGATGCTCTTGGCAGAATTGCTGATAAATTATAG 1425 0.4828 MYGHLWIILLMLGDQLSRSLCCSDKTQLPSLSSLMLTNNQNFGLDSGYYVTFFFGWPFILSDILVHEVTFSKIYVDSKNFYPLNMWLEIQLLTFVYGTTIRTLIILAANNTEQQLSLGPNPNTVDGQTDGTTNGVNVRPPSTDGGEDGIKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDSESFWVMRNDLRREKKLPGFFDKEVYDILDSGSQAPALSLALAPASATGTVPGEKGKDSRGVAAEEAEADAEPHLYDSRSAAGEDGLFSDFEQEEAGVSPVKEAARKDVLTHTTPVPAPIPISEKQYQPLLRSGQGEGNAQGGSNEKQRGPNPEMGSTSQGGRKRKRFPTTDEEDEILQNQLIDVLERNGKMLSTQLEAQNINFQLDREQRKDHASHLVAVLDKLADALGRIADKL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1232 474 Gene3D - 157 227 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 284 320 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 296 317 - -
Lele21g1232 474 ProSiteProfiles Myb-like domain profile. 156 222 IPR001005 -
Lele21g1232 474 Pfam Myb/SANT-like DNA-binding domain 156 245 IPR044822 -
Lele21g1232 474 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 125 474 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 117 139 - -
Lele21g1232 474 CDD GT1 155 229 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 370 397 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 370 413 - -
Lele21g1232 474 MobiDBLite consensus disorder prediction 117 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1232 Lele-ChrLele21 16274055 16280563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1232 142 313 Trihelix Transcription Factor Family AT3G25990 25.140 5.06e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele21g1232 Myb_DNA-bind_4 1.5e-11 CL0123