Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1224 ATGAATCTGAAGGAAGAGGAAAACATAGGAAAGTTTGAGAAGAAGGGTGTCCATGCAGAAAGGAGAGAGATGGTGAGGCTCACTGCCGACCTAATCTGGAAAAGCCCTCATTTCTTTAATGCCGTTAAAGAGCGAGAGTTAGATCTGCGAGGGAACAAGATTGCTGTAATCGAAAATTTGGGCGCTACTGAGGACCAATTTGACACCATAGACCTCTCTGACAATGAGATTGTCAAGCTGGAAAACTTACCATATCTCAATCGGCTGGGTACCCTACTCATAAATAACAATAGAATTACTAGAATTAATCCTAACATCGGAGAGTTCTTGCCAAAATTACATACACTGGTTCTTACAAATAACAGGCTTGTCAACTTGGTGGAGATTGATCCTTTGGCATCCCTTCCAAAGCTTCAGCACCTTAGTTTATTGGATAACAATATTACAAAGAAACCAAATTACAGGCTTTACGTCATTTACAAACTGAAGTCCCTTCGTGTTTTAGATTTCAAGAAAGTGAAAAATAAAGAGAGGTTGGAAGCCAAAAACTTGTTTTCTTCCAAAGAAGTGGAAGAAGAAGTTCAAAGGATACCGCCTAAGGTGATTTCACCTGTTGAAACTCCAAATGTCTCTGAAGTTGCACAGGAACAACAGACATCAAAAGTGGCTGCACCTACACCAGAGCAGATTATTGCAATCAAGGCTGCCATTGTGAATTCACAAACTCTTGAAGAGGTTGCAAGGCTTGAAAAGGCACTAAAGTCAGGTCAGCTTCCAGAAGATTTCAGAAGCTTGGATGAAAATGTAACGTCAAATAATGTTAAAGAAAAGCATGATGGAGTGCTTCATTTAGACAAGAACCAAGATGAGGGTGAACCTAATGGTACAGAAAAGCAGGGGAATGCTGATTCTGCTCCCATGGAACAGGATTAG 933 0.4051 MNLKEEENIGKFEKKGVHAERREMVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQHLSLLDNNITKKPNYRLYVIYKLKSLRVLDFKKVKNKERLEAKNLFSSKEVEEEVQRIPPKVISPVETPNVSEVAQEQQTSKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPEDFRSLDENVTSNNVKEKHDGVLHLDKNQDEGEPNGTEKQGNADSAPMEQD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1224 310 PANTHER U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A 24 273 IPR044640 GO:0000398|GO:0030620
Lele21g1224 310 MobiDBLite consensus disorder prediction 270 293 - -
Lele21g1224 310 ProSiteProfiles Leucine-rich repeat profile. 66 87 IPR001611 GO:0005515
Lele21g1224 310 MobiDBLite consensus disorder prediction 262 310 - -
Lele21g1224 310 MobiDBLite consensus disorder prediction 294 310 - -
Lele21g1224 310 ProSiteProfiles Leucine-rich repeat profile. 112 133 IPR001611 GO:0005515
Lele21g1224 310 Pfam Leucine-rich repeat 24 196 - -
Lele21g1224 310 Gene3D Ribonuclease Inhibitor 24 199 IPR032675 -
Lele21g1224 310 SUPERFAMILY L domain-like 35 182 - -
Lele21g1224 310 FunFam U2 small nuclear ribonucleoprotein A 24 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1224 Lele-ChrLele21 15264762 15285512 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1224 21 15264762 15285512 Lele17g0826 17 19665969 19668102 CCT
Lele21g1224 21 15264762 15285512 Lele18g0699 18 4260078 4262287 CCT
Lele21g1224 21 15264762 15285512 Lele19g0740 19 4348502 4350720 CCT
Lele21g1224 21 15264762 15285512 Lele20g0720 20 14234351 14236564 CCT
Lele21g1224 21 15264762 15285512 Lele21g1224 21 15264762 15285512 ECH