Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1222 ATGGAGGACAGAGTAGTGAACACTATCGCTGTAATATCAGTGATTGCTCTTATCACTTTTGTCGTCATCGCTCACGTCTTCTTAAAGCGTTCAAAAGCCTTCTTCCTCATCTTAGGGGCCGATGTTGCGGTCAGCCTCGTCGTCTTTGCCTGTGTTCTAATCCGATTGCGATACAACCGCAGAAGAAAACTGATAGAATCCCGATATAAATCTGAAGGTAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGAAAAGTCGCCGGCGTTCCGATCAAGTTCCGATTCCAAGAGCTCGAAAACGCCACCGATGGATTCCAATCGCTACTCGGCCAAGGAGCCTCTGCTTCGGTCTTCAAAGGTATTTTAAACGACGGCACGTCGGTCGCCGTCAAGAGAATCAACGGCGAAGAACGAGGCGAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGTGTCCAGCACGTCAACCTTGTTCGCCTGATTGGATATTGCAACTCCGCCACAGCCCCAAGGTACTTAGTTTACGAGTTTATCCCAAACGGGTCTTTGGATTCTTGGATATTTCCCATTAAAACCGAAAATCGAAGATCTCGCCGTGGGTTTTTATCGTGGAGCTTGAGATACAGAGTAGCCATTGACGTAGCCAAAGCTCTTTCTTACCTTCACCATGATTGCAGATCGAGAATACTACACCTAGATGTAAAACCAGAGAACATTTTAATAGACGAGAATTTCAAAGCAGTCGTCTCAGATTTCGGTCTCTCGAAGCTGATGGGGAAAGACGAGAGCGAAGTGATGACAACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTCTTAGAACATGGAGTTTCAGAGAAAACAGATATATACAGTTACGGAATGGTACTATTAGAGATAATAGGAGGAAGGAGAAACGTGCGTTTAATCCAAGATCTGAAGGACAAGGCAAAGAAGAAGATGCAGTATTTTCCCAAGATTGTGAACGAGAGAGTAAGAGAAGGAAAGTTAATGGAGCTTGTGGATCAAAGGGTGATTGAAAGTGGGGGTGTTGATGAGAAAGAAGTGAAGAGATTGGTCTACGTGGCACTGTGGTGCATACAGGAGAGGCCAAGGGTGAGGCCAAGCACTAAACAAGTGGTGGAGATGCTTGAAGGAAGAGCGAGGGTGGATGAGCCACCTGATACGAGGATGGTTATGGGTAATTTGTTTTCAATGGAAGGAGAAGAAGAAGGAGGAGAAAGAGAAAATTACGAGAATACTACGAGATTAGCCGATTATGTGGCAAGCCAGAGGGCAATAGGAAATTTGGAATATGGATCTACCTACTCCATGGCCACCACGGTTCTATCTGGAAGATAG 1371 0.4588 MEDRVVNTIAVISVIALITFVVIAHVFLKRSKAFFLILGADVAVSLVVFACVLIRLRYNRRRKLIESRYKSEGRELRIEYSFLRKVAGVPIKFRFQELENATDGFQSLLGQGASASVFKGILNDGTSVAVKRINGEERGEKEFKSEVAAIASVQHVNLVRLIGYCNSATAPRYLVYEFIPNGSLDSWIFPIKTENRRSRRGFLSWSLRYRVAIDVAKALSYLHHDCRSRILHLDVKPENILIDENFKAVVSDFGLSKLMGKDESEVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIIGGRRNVRLIQDLKDKAKKKMQYFPKIVNERVREGKLMELVDQRVIESGGVDEKEVKRLVYVALWCIQERPRVRPSTKQVVEMLEGRARVDEPPDTRMVMGNLFSMEGEEEGGERENYENTTRLADYVASQRAIGNLEYGSTYSMATTVLSGR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1222 456 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1222 456 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 398 - -
Lele21g1222 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Lele21g1222 456 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Lele21g1222 456 Gene3D Transferase(Phosphotransferase) domain 1 179 402 - -
Lele21g1222 456 FunFam Putative receptor-like protein kinase 179 395 - -
Lele21g1222 456 Pfam Protein kinase domain 107 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1222 456 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1222 456 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Lele21g1222 456 SUPERFAMILY Protein kinase-like (PK-like) 86 388 IPR011009 -
Lele21g1222 456 FunFam Putative receptor-like protein kinase 70 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1222 Lele-ChrLele21 15131102 15132472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1222 1 399 Receptor kinase-like Gene Family AT5G20050 64.838 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele21g1222 Pkinase 8.1e-46 CL0016