Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1219 ATGGACGGGCTCCTCGCCGGCGCTGGATATAAGGTCAAGTCGTCGGAGCTTAATCAAGTGGCTCGACGCCTCGAGCGGCTTGAGAATGTTATGGTCAACTCTGCAGCAGACATTTCTCAACTTGCTTCGGATGCTGTTCACTATGACCCCTCCGATATTGGCTCTTGGGTTGACACTCTTCTCACTGAATTGAACCAGACCGTTTCTCTGCCGTGTGATCTGTTGGAGTTGCCGGATCTACCAACTTGTCCTTCGTTGCTTGAAGAAACGGGTGTCAATAATCGATGGGTCGTGTGTCAGAATGATGAGAACCACCATAGCTTCAATCCTCAGCGGCAGCAGCAATTTCAACAATTGACAGTGGTAACGTCGATGGAAGAGAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCGGATTCTGTTCAACGTGGCGAGCTAGCTCTTGCCGGCTCGCTTATCGAGGACATGCAGGGTTTGTTGGCGCACGTGAACACCAGCTGTGGTTTCGGAAAAGTCGCCGGATACTTCATCGACGCCCTGAGCCTCCGGATCTTCGGCCCACGGACCATTGGCACTGGCTCGCCTTATGAGGACGAGGTTTTGTACCATCACTATTACGAGGCTTGTCCTTACCTCAAGTTCGCTCACTTCACGGCAAACCAAGCCATCTTGGAAGCTTTCAACGGCCACGATTGCGTCCATGTGATCGACTTCAACCTCATGCACGGCCTCCAGTGGCCGGCCTTGATTCAAGCTCTGGCCCTCCGTCCCGGTGGGCCCCCCTTACTGAGGTTGACCGGCATTGGTCCGCCGTCTCCCGACGGCCGTGACACTCTCCGTGAAATTGGGCTGCGACTCGCTGAGTTAGCTCGGTCCGTCAACGTCCGATTTGCTTTCCGTGGTGTGGCAGCTTCTAGACTCGAAGACGTTAAGCCATGGATGCTCCAGGTAAGCCCAAAAGAAGCCGTGGCGGTGAATTCCATAATGCATCTTCACCGCCTCCTCGGATCCGACCGGACTAGAGGATCCGCCATCCAATCTGTCCTTAGCTCGATCCGAAGCTTGAACCCGAAAATTATGACAGTGGGGGAACAAGAATCGAACCATAACCAACCCGGGTTCTTAGACCGGTTCACAGAAGCTCTGTATTACTACTCCACCATGTTCGACTCGCTAGACGCTTGCTCCTTCCAGCCGGATAAGGCCTTAGCCGAGATTTACATACAGAAGGAGATATGCAACGTTGTGTGCTGTGAGGGATCGGCTCGCGTGGAGAGGCACGAGCCGCTGGCTAAGTGGAGAGATCGGCTAACTAAAGCCGGCTTTAGGGCTCTACACTTAGGATCAAATGCTTTCAAGCAAGCCAGCATGCTCTTGACTCTTTTCTCAGCTGAAGGTTATTGTGTTGAAGAGAACGAAGGATGTTTGACGTTGGGTTGGCACAGCCGACCCCTCATCGCGGCTTCGGCTTGGCAAGCCGATCCAGAGTATGAAGTGGCTTAA 1512 0.5344 MDGLLAGAGYKVKSSELNQVARRLERLENVMVNSAADISQLASDAVHYDPSDIGSWVDTLLTELNQTVSLPCDLLELPDLPTCPSLLEETGVNNRWVVCQNDENHHSFNPQRQQQFQQLTVVTSMEENSGIRLVHMLMTCADSVQRGELALAGSLIEDMQGLLAHVNTSCGFGKVAGYFIDALSLRIFGPRTIGTGSPYEDEVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMHLHRLLGSDRTRGSAIQSVLSSIRSLNPKIMTVGEQESNHNQPGFLDRFTEALYYYSTMFDSLDACSFQPDKALAEIYIQKEICNVVCCEGSARVERHEPLAKWRDRLTKAGFRALHLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQADPEYEVA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1219 503 Pfam GRAS domain family 133 495 IPR005202 -
Lele21g1219 503 Gene3D - 1 64 IPR038088 -
Lele21g1219 503 SMART DELLA_2 2 74 - -
Lele21g1219 503 Pfam Transcriptional regulator DELLA protein N terminal 2 67 IPR021914 -
Lele21g1219 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 120 491 IPR005202 -
Lele21g1219 503 Coils Coil 10 37 - -
Lele21g1219 503 ProSiteProfiles GRAS family profile. 124 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1219 Lele-ChrLele21 13859992 13861503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1219 1 495 GRAS Transcription Factor Family AT1G14920 50.097 2.88e-165 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele21g1219 GRAS 2.7e-124 CL0063