Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1212 ATGCTTCTCAAATCTTTTCCACACCATCTCGCTGATCAAACTCGCAACCTCACGCTCGAAGAATTCGTTTCTCGCCTTGAAGATGAACGCCTCAAGATCGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTCACCAACGCTTTGGAGGAGTCAAGGGAGCAACTTGAGGCTTTGAGAGGAAATGAAGGCAAGAAAAGTGCAGTTCTGGAAGAATTTATAACCTTAAAGCATTCATCAACTTGTGAAAGTTCTGATAAAGCATCAAGCCATTGTGATAAAGCTAATTGGATGATATCTGCTCAGTTATGGAGCCAAGCTAGTGAAGAAACCAGGCAACAATATTCCACAATTGGATCGGCTAATACCAATAAAGAAGCTGATCATGATCAGATTGGTGGGTTCGATGTTAGCCCTAATAATCTTCACAGAAATATTAGTGGAGGACCCTTTCTTCCATTCTCAAATAATAAGGAACGAATTAGCTCGAATCAGTGTTATTCATCGACGCCATTGCAGGCTCTTCTAGAGCTGGCACTTGCCTCTGTTGATAAGAAACAAATGAAGGGCAAGAAATTATACTCAGAGACGATTGATAATTTTGGTAAAGGAGGAAGCCATATTAATGGTGGTGGGGTGGGGTGTGATCAAGGAAAATGGATGATTACAGTTTCTTTGTGTGAGGTAAAAACAACAAGTAAAACTGCTTCGAAGTCTACCACCACCACACAAAGTCAACGGAAAGCAAGAAGGTGTTGGTCACCGGGCTTGCACCGGCGATTTGTGAATGCTCTTCAGATGCTTGGTGGATCTCAAGTTGCCACTCCGAAACAGATTAGGGAGCTGATGAAGGTTGAAGGATTGACCAATGATGAAGTTAAAAGTCATCTCCAGATCGCGAGGGTGCAAATGGATGTGCGTTTATCCATTATAAAAGAATGA 948 0.4272 MLLKSFPHHLADQTRNLTLEEFVSRLEDERLKIDAFKRELPLCMQLLTNALEESREQLEALRGNEGKKSAVLEEFITLKHSSTCESSDKASSHCDKANWMISAQLWSQASEETRQQYSTIGSANTNKEADHDQIGGFDVSPNNLHRNISGGPFLPFSNNKERISSNQCYSSTPLQALLELALASVDKKQMKGKKLYSETIDNFGKGGSHINGGGVGCDQGKWMITVSLCEVKTTSKTASKSTTTTQSQRKARRCWSPGLHRRFVNALQMLGGSQVATPKQIRELMKVEGLTNDEVKSHLQIARVQMDVRLSIIKE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1212 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 250 304 IPR006447 GO:0003677
Lele21g1212 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 304 IPR044787 GO:0003700|GO:0006355
Lele21g1212 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Lele21g1212 315 SUPERFAMILY Homeodomain-like 248 304 IPR009057 -
Lele21g1212 315 Coils Coil 44 64 - -
Lele21g1212 315 Gene3D - 249 306 - -
Lele21g1212 315 Coils Coil 19 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1212 Lele-ChrLele21 11796871 11799922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1212 1 305 G2-like Transcription Factor Family AT2G03500 45.714 5.21e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele21g1212 None None None