Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1204 ATGCTGGCGCGTGAAATAGCATACCTAAATCCACGAACTTTGTCTTCCCCGCGGCTATTGAATGAGAGACAGAGGTGCAGTAGATCTACCGCGGCCGCCATGTGGAACTCTGCCAAGAATGCATTTGCCAGGTCGGCATCGTTTAGGGAGGACTTGGACGACGAGGAGGAGCTCAGGTGGGCCGCATTGGAGAGGTTGGCGACGTACTCGCGAGCTCGCAGAGGCATTTTCATGGACCTTTCTGGTGAGAAGAAGGAGATTGATGTAAGCGAGCTCGAACCACAGGAGCGGATTCTAGTTCTTGAGAGATTGGCTAATTCCGTTGGCGATGACCCCGAGATGTTCTTCAATCAAATGAGAAGCCGATTTGACAAGGTAAAGCTGAAGTTTCCGAAGATTCAAGTTCGATTTCAAAACTTGACAGTTGAAACTTATGTTCATGTTGGAAGTAGAGCGCTGCCTACGATTCCTAATTTTATCTGCAATATGGCCGAGGCTCTTTTAAGACAGTTGCGACTATACAGAAGAAAGCGAAGTAAATTGACAATTCTAGCCGACATTAGTGGGATTATTAGACCTTCAAGATTTACTCTACTGCTGGGTCCGCCAAGCTCTGGAAAAACGACACTACTTTTAGCTCTTGCCGGCAGGCTGGGACCTGGTTTGCAGGTACTCGTATTTTCAACGCCCATAATGTCAGGGAGCATCACATACAATGGACATACTCTCAATGAGTTTGTTCCTCAGAGAACAGCTGCTTATGTCAGCCAACAAGATTCACACGTGCCAGAGATGACTGTAAGGGAGACTCTTGATTTTGCAGGCCGCTGTCAAGGCGTTGGATTTAAACATGATATGTTGCTGGAACTCGCCAGAAGAGAAAAGAATTCTGCGATAAAACCTGACGAAGATCTTGATATTTTCATGAAGTTCCGTAAATCTTCTGAAAGTACTAAAATATTTATGACAAAGATATTAGGTATGGACATATGTGCTGAAACATTGGTAGGAGATGAAATGCTCAAAGGCATTTCAGGAGGGCAAAAGAAGCGTCTTACAACAGTTCAACTAAGTACCAAATTATCAAATATCTTAAGCATTCGACCCGTGCACTTGATACAACCACTATCATATCTCTTCTACAACCAGCTCCCGAGACATGAGTTGTTTGATGAGGTCATTCTTTTGTGTGAGGGTCAGATTGTGTACCAGGGACCTCGTGAGTCTGCTCTTGAATTTTTCAAATTGATGGGATTTAGTTGTCCTGAGCGAAAGAATGTGGCAGACTTCTTGCAAGAAGTGACATCAAAAAAGGACCAAGAGCAGTACTGGTCCGTCCTTGACCGTCCTTACCGGTACATACCTGTTGGGCAGTTTGCAGAAGCTTTTGCCTCATATCGCGATGGCAAGAATTTGTCTGAGGAACTAAAAGTTCCTTTCAATAAACGCTTTAATCACCCCGCAGCCTTGGCAACTACTAACTATGGAGTGAAAAAGCTTGAACTGCTCAAAACCAGCTACCAATGGCAGAGGCTACTGATGAAGAGAAATTCATTTATTTATGTTTTTAAATTTGTTCAGCTTCTTTTGGTTGCTTTGATCACAATGAGCGTTTTCTTCCGCACAACAATGCATAAAAACACAATAGACGATGGAGGCTTATATCTTGGGGCACTGTACTTCTCTATGGTAATTATTCTCTTCAATGGTTTTACGGAGGTATCAATGTTGGTTGCAAAGCTTCCAGTAATTTACAAGCACAGAGACTTGCACTTCTATCCCAGTTGGGTTTATACGCTCCCTTCTTGGCTCCTTAGCATCCCAACTTCCCTCATGGAGGCCGGATGCTGGGTGTTAATCTCGTACTCTACGATCGGATATGATCTTGCTATTTCTAGATTTTTTAAGCAGTTGTTGCTATATTTCCTTCTACACCAGATGTCAATTGGTCTCTTCCGTTTGATAGGATCCTTGGGCAGGAATATGATAGTAGCCAACACCTTTGGATCCTTTGCCATGTTGATTGTGATGGCTCTTGGAGGATACATAATTTCAAGAGACCGTATACCTCCTTGGTGGATATGGGGCTTTTGGATTTCTCCTTTAATGTATGGACAAAATTCTGCTTCTGTAAATGAGTTCCTTGGACATTCATGGCATAAGAAAGCAGGAAATCATACCACCCTTCCCTTGGCTTGGGGAAGCCCACAAGCTGTTGTGTCAAAGAAGGAGCTGGAAGATAGAGAGAAGAGGAGGAGAGGTGAAAGTTCTGTGATTGTGCTGAGAGAGTACTTCCAGCATTCAGCATCAAATGAAGACAAGTTGCAGCTTCTAGTTGATGTTACAGGAGCATTCAGGCCAGGTGTGCTGACAGCATTGGTTGGAGTTAGTGGCGCTGGAAAAACCACTCTCATGGATGTATTAGCTGGAAGAAAAACTGGTGGAACCATAGAAGGGAGTATATACATATCCGGTCATCCGAAAAGACAAGACACTTTTGCAAGAGTTTCTGGATATTGTGAGCAGACTGATGTTCATTCTCCTTGCTTGACCATCTTGGAATCGCTTCTATTCTCTGCTTGGCTTCGATTACCTTCAGACGTTAGCTTGGAGATACAGAAAGCTTTTGTTGAGGAGGTAATGGAGCTTGTGGAGCTCACTTCATTGAGTGGAGCACTTGTGGGGTTACCTGGAATTGATGGGTTGTCAACAGAACAACGAAAAAGGTTAACTATAGCAATTGAACTGGTTGCCAACCCTTCTATAGTCTTCATGGATGAGCCCACATCAGGGTTGGATGCTAGGGCAGCCGCCATTGTGATGCGAACTGTGAGGAATATAGTAAATACTGGAAGAACCATTGTGTGCACAATCCATCAGCCTAGCGTAGAAATATTTGAATCCTTTGATGAGGCAACTTTATTGTATTTTCACAGGGAGACGCAACAAGATATATTTAATGCCATGGGATCTATGTACGCAGCAATCCTCTTTATTGGCATCACAAATGGCACGGCCGTTCAACCTGTTCTTTCTGTTGAAAGATTTGTTTCATATCGAGAAAGAGCAGCAGGGTTGTATTCAGCTTTGCCATTTGCTTTTGCTCAGGGTGCTATTGAGTTTCCTTACGTATTTGCCCAGTCTTTGATATACTGCTCAATATTCTATTCCATGGCTTCCTTTGAATGGACTGCTGTTAAGTTCATTTGGTACATATTCTTCATGTACTTTACCATGCTGTATTTTACCTTCTATGGAATGATGACCACGGCTGTCACACCAAATCATCATGTTGCTGCCATTATTGCTGCTCCATTTTATATGTTGTGGAACCTTTTCAGCGGTTTCATGATCCCTCATAAGAGAATTCCTATATGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCTTGGACTCTCTATGGTCTGGTAGCTTCTCAATATGGTGACGATTATAAACTTGTGAAGCTATCGGATGGAATAAACTGGAGACCAATAAAGCAGATGCTGGTTGAAGTGTTTGGTTATAAGCATGATTTCTTGTGCACTGCTGCAATAATGGTGCCTGGTTTCTGCATATTTTTTGCAATAATATTTTCCTTTGCAATTAAATCCTTCAATTTTCAAAGGAGATGA 3636 0.4293 MLAREIAYLNPRTLSSPRLLNERQRCSRSTAAAMWNSAKNAFARSASFREDLDDEEELRWAALERLATYSRARRGIFMDLSGEKKEIDVSELEPQERILVLERLANSVGDDPEMFFNQMRSRFDKVKLKFPKIQVRFQNLTVETYVHVGSRALPTIPNFICNMAEALLRQLRLYRRKRSKLTILADISGIIRPSRFTLLLGPPSSGKTTLLLALAGRLGPGLQVLVFSTPIMSGSITYNGHTLNEFVPQRTAAYVSQQDSHVPEMTVRETLDFAGRCQGVGFKHDMLLELARREKNSAIKPDEDLDIFMKFRKSSESTKIFMTKILGMDICAETLVGDEMLKGISGGQKKRLTTVQLSTKLSNILSIRPVHLIQPLSYLFYNQLPRHELFDEVILLCEGQIVYQGPRESALEFFKLMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYIPVGQFAEAFASYRDGKNLSEELKVPFNKRFNHPAALATTNYGVKKLELLKTSYQWQRLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHKNTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVIYKHRDLHFYPSWVYTLPSWLLSIPTSLMEAGCWVLISYSTIGYDLAISRFFKQLLLYFLLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPPWWIWGFWISPLMYGQNSASVNEFLGHSWHKKAGNHTTLPLAWGSPQAVVSKKELEDREKRRRGESSVIVLREYFQHSASNEDKLQLLVDVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGSIYISGHPKRQDTFARVSGYCEQTDVHSPCLTILESLLFSAWLRLPSDVSLEIQKAFVEEVMELVELTSLSGALVGLPGIDGLSTEQRKRLTIAIELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSVEIFESFDEATLLYFHRETQQDIFNAMGSMYAAILFIGITNGTAVQPVLSVERFVSYRERAAGLYSALPFAFAQGAIEFPYVFAQSLIYCSIFYSMASFEWTAVKFIWYIFFMYFTMLYFTFYGMMTTAVTPNHHVAAIIAAPFYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLVASQYGDDYKLVKLSDGINWRPIKQMLVEVFGYKHDFLCTAAIMVPGFCIFFAIIFSFAIKSFNFQRR 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1204 1211 Pfam ABC-2 type transporter 974 1148 IPR013525 GO:0016020|GO:0140359
Lele21g1204 1211 Pfam ABC-2 type transporter 503 714 IPR013525 GO:0016020|GO:0140359
Lele21g1204 1211 SMART AAA_5 787 981 IPR003593 -
Lele21g1204 1211 SMART AAA_5 193 379 IPR003593 -
Lele21g1204 1211 Gene3D - 171 366 IPR027417 -
Lele21g1204 1211 Pfam ABC transporter 185 365 IPR003439 GO:0005524
Lele21g1204 1211 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 387 727 - -
Lele21g1204 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 414 IPR027417 -
Lele21g1204 1211 FunFam ABC transporter G family member 40 764 994 - -
Lele21g1204 1211 Pfam ABC-transporter N-terminal 95 159 IPR029481 -
Lele21g1204 1211 Pfam ABC transporter 780 930 IPR003439 GO:0005524
Lele21g1204 1211 Gene3D - 765 996 IPR027417 -
Lele21g1204 1211 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 168 423 IPR003439 GO:0005524
Lele21g1204 1211 CDD ABCG_PDR_domain2 773 975 IPR034003 -
Lele21g1204 1211 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 759 1002 IPR003439 GO:0005524
Lele21g1204 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 773 976 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1204 Lele-ChrLele21 10892520 10903717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1204 751 962 Calmodulin-binding Proteins AT2G36910 26.389 5.95e-07 52.4