Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1197 ATGGAGAATGAAATATTCCCTTTCCTTTCATCGGAAGTTTCTGCATTTCAGGTTTCTCCATTAATGGCTAGCCATAACAGCAAGCCTATCAAAGAAGAAGAAGAAGTACAGAAACAGAAAGCTCCTCCTGCTGAGTATGGGCATTCAATTATCAAACCTACAATCTCTGAGTTCAGTGGCGTTCACACTGATGAGAAGTTGGCTAATGTGATTGCTTGCTATGTCGACTCGCTAAAGCATCTAAAAGATATTTGCTATCCAGCTAATCAAGACATAAACTATGAAGCATTGATGAAGTTGATATGTCTTCGCTTAAACAATGCTGGTGATCCATTTACAGGGAGTAGCTACAAGCTTAATTCATATAACTTTGAGCTGTGTGTATTAGATTGGTTTGCTAATCTTTGGGAAATTGAGAAGAATGAGCACTGGGGATATGTTACAAATGGTGGAACCGAAGGAAATCTTTATGCAATCTTAGTAGGGAGGGAACTATATCCAGATGGAATTTTGTATACATCAAAAGAATCGCATTATTCATTGTTCAAGATAGCAAGAATAGCTAGAGTCAAGTGTGTGGTTGTTGGGACCAAGCCCTCTGGTGAGATTGACTATGATGAACTAAAGGCTTCACTTCTTGCTCACAAGGACCAACCAGCCATCATCAACCTAAATCTGGGTACAACAATAAAAGGAGGTATTGATGACCTTGATGTTGTAATACAAATACTTGAGGACTGTGGCTTTGCAGAAGATCGATTCTACATTCACTGTGATGCCGCTTTATTCGGATTGATGCTCCCATTTATTAACGGAGCACCAAAGATTTCTTTTAAGAAGCCTATTGGAAGTGTAACTGTTTCAGGCCATAAGTATCTTGGAAGCCCAATCCCATGTGGTGTTCTGATAACACGTTTGAATTATGTTGATCTTCTCTCTAGAGATGTAGAATACATCGCTTCGAGAGACACCACAATCTCAGGAAGTCGAGGAGGCCATACTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTAAAAAAGATGTGAATGAATGCATCAACAAGGCGATCTATCTTCGAAATCGCCTGAGGGAACATGGCGTCGGGGTCATGCTCAATAAGTTTAGCAATATCGTCGTGTTCGAGAGGCCTTGTGATGATGCATTTGCTCGCAATTGGATGTTAGTTAGCGAAGGAAAACTATCACACATAGTGGCGTTGCAACATGTGACCATGGAAGTTCTAGATTTGTTTGTGAGCGAGTTTGTGAAGAATCGAAAGATTTGGTATGAAGATAATGAAGGCAGCAAGAAAGTTCCCTGTATTGCTGAGGATATTGGTACTAACAACTGTGCTTGTTCTTTCCACAATAAATAA 1392 0.4023 MENEIFPFLSSEVSAFQVSPLMASHNSKPIKEEEEVQKQKAPPAEYGHSIIKPTISEFSGVHTDEKLANVIACYVDSLKHLKDICYPANQDINYEALMKLICLRLNNAGDPFTGSSYKLNSYNFELCVLDWFANLWEIEKNEHWGYVTNGGTEGNLYAILVGRELYPDGILYTSKESHYSLFKIARIARVKCVVVGTKPSGEIDYDELKASLLAHKDQPAIINLNLGTTIKGGIDDLDVVIQILEDCGFAEDRFYIHCDAALFGLMLPFINGAPKISFKKPIGSVTVSGHKYLGSPIPCGVLITRLNYVDLLSRDVEYIASRDTTISGSRGGHTSIFLWYALNKRGFNGLKKDVNECINKAIYLRNRLREHGVGVMLNKFSNIVVFERPCDDAFARNWMLVSEGKLSHIVALQHVTMEVLDLFVSEFVKNRKIWYEDNEGSKKVPCIAEDIGTNNCACSFHNK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1197 463 Gene3D Aspartate Aminotransferase, domain 1 342 431 IPR015422 GO:0003824
Lele21g1197 463 PANTHER - 28 462 - -
Lele21g1197 463 SUPERFAMILY PLP-dependent transferases 93 430 IPR015424 -
Lele21g1197 463 Gene3D - 104 341 IPR015421 GO:0003824
Lele21g1197 463 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 284 305 IPR021115 GO:0016831
Lele21g1197 463 Pfam Pyridoxal-dependent decarboxylase conserved domain 123 373 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1197 Lele-ChrLele21 10363494 10367730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1197 226 372 Calmodulin-binding Proteins AT2G02010 28.205 7.74e-09 55.8