Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1194 ATGTCAAGCTGCAGCAATATGGATGTTGGTTCTGAGCAACTATGCTATATCCCCTGCAAATTTTGCAACATTGTTCTTGCGGTAAGTGTTCCATGCGGTAATCTTTTTGACATAGTGACCGTCCGATGTGGTCACTGCAGCAACCTATGGTCTGTGAACATGGCCGCCGCATTTCAGTCACTATCATGGCAACATGTTCAGGCTTCTGGGTTATCCAATAATCCAGAGTATAGAATCGAGACTGGTCCCTCTTCAAGATGTAACAATAGGATTGCAATGAGAGCCCCCACAACACGTATTAATGCAACTGAGGAAGGGGCTGTGACTAGGCCTCCCGAGAAGAGGCAGCGAGTACCTTCTGCGTACAATCAGTTCATAAAAGAAGAGATTCAGCGGATCAAAGTCAATAACCCAGATATCAGTCACAGGGAAGCATTCAGTACTGCTGCAAAGAATTGGGCACATTTCCCTCACATTCATTTCGGCTTGATGCTGGAGGCCAATAATCAAGCTAGGATTGGGAATGAAATTCGGAGAAGCATTTAA 546 0.4524 MSSCSNMDVGSEQLCYIPCKFCNIVLAVSVPCGNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQHVQASGLSNNPEYRIETGPSSRCNNRIAMRAPTTRINATEEGAVTRPPEKRQRVPSAYNQFIKEEIQRIKVNNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQARIGNEIRRSI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1194 181 Gene3D High mobility group box domain 101 158 IPR036910 -
Lele21g1194 181 FunFam axial regulator YABBY 5-like 101 159 - -
Lele21g1194 181 PANTHER PROTEIN YABBY 6-RELATED 1 171 IPR006780 GO:0007275
Lele21g1194 181 SUPERFAMILY HMG-box 106 156 IPR036910 -
Lele21g1194 181 Pfam YABBY protein 11 163 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1194 Lele-ChrLele21 10004161 10008024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1194 5 174 C2C2-YABBY Transcription Factor Family AT2G26580 71.176 2.18e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele21g1194 YABBY 1.8e-66 CL0114