Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1181 ATGGCCCCCATATCTCTGTTCTTAGTATTTGCAGTTCTATCTGCAAAAGACGTTAGCGCTCAAAAAAAAGATTCCAACGCCATAATTTTGGGTTCTTCTCTCTTCCCAGAAACGAATTCTACTTCATGGGTGTCACCGTCTGGTCTTTTTGCCTTCGGATTTCATGCACAAGATAATGGCTTTGCTGTTGGAATACGGCTATTAGGTGAACATGGAGGAACAATCATTTGGACACCTAACTTGAGCAATCTATCTGCTTCTTCTGATTCAGCGATCGAATTAACCAAATATGGTCAACTTCTGCTTAGAAACGAGAAACTGAAGAAAGTGATCCTTGCTAATGCGGCTGAACCTGCAGATTACGCATCTATGCTTGATTCTGGGAATTTTGTGCTTTATAGTAAAAACGATAGTGTCATCTGGCAAAGCTTTGATTACCCCACCGACACTATTTTAGGAGGTCAAAATTTATCTTCGGCCCAAGAACTCATATCTGCAAATAGACATTTTCTTCTCCAAATGCAGACTGATGGAAATCTTGTCGCCTACCCTATGAACAATAGAACAATAGATGATGCTTACTGGGCCTCAGATACATTTGAATCACAGGTGTCACAGCTTACTCTTAATCTTACAGGCTCTCTTTGCCTAGTTGATGATGATGGGAATACCACCAAGGTTCTAGCCAATAGTAGCAACTATCATGGAGGGAACAAAAACTTAATGATCTATCGTGCAACGTTGGATTTCGATGGTATTTTTAGATTGTATGTTCACACATTTGAGAAGAATAATAGCTTCAATGTTAAACGTGTGTGGCAATCTGTGTCTAATCAATGTGAAGTCAAGGGCTTTTGTGGTTTCAACAGTTATTGCTCCATGAATGGCGATGATGATAATGAAGCTGTTTGTGAGTGTTATCCTGGATTCACGCCCACAAATGGGAATAATAATAAAAGCATTAAGATGTTCTTGGACTGCGAACAAAGGAGCAAAGATGACTGTAAAACTAGTGAAGACCCTAAGATGTTGTACGATGTTGTTACCTTACAACATGTGCAATGGAGCCTTGTTCCTTATTTGGTTATAACATTGGAAATGGAAGCTTGTGGGAATTCTTGCAAGGAAGACTGTGATTGTGGGGCAGCGTTACATGCAAATGGCCTGTGCAATAAGTATAGGCTTCCGATTAGATTTGGCAGAATTAATTATGATGTAACAAACACGGCCCTATTCAAGTTTCCTGAAACAGAAACCATTCCTCCAAATCAAAAGAAGCCAGAGGTTATTGTAGATGACAAGAAAAATCTGATTTTGACTCTGGTAATCACCTTAGCTTCCATTTCATTCCTTTGCCTAGTCTTTGCAATTTCTATTTTCTTCATCTACATGCGCAAAGTCTATTCATACACAAAGCTCTCTGCCGGTAGCGAAAAGTTGCGGTTCACTGAAGATTGTAGCCTACGAACATTTTCCTTTGGTGAATTGGTGAATGCAACAGGAAACTTCACAGAAGAGATCGAACACTCAACAACAATGGCAATGACAAGTGGCTACGTGGCACCCGAACGGCAGAAGGAATCATCAACATCCATAAAAGTTGACGTGTACAGCTATGGCGTGGTGCTGTTGGAGATCATATGTTGCAGAAGGAACATAGATGTGAATGTTGCCTCAGAAGAGGAAATGATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAGAGGGGAATTGAAGAAATTGGTAGTAGATGAAGACGTTGAATGGAGGACATTGGAGAGAATGGTGAAGGTGGCCTTATGGTGTGTCCAAGAGGATTTGTCTCTACGTCCTTCCATGAAGAATCTGATTTTGATGTTGGAAGGGTTAAAAGAGATCCCAATTCCTCCATCTCCAATCCCACTTGGATAA 1911 0.405 MAPISLFLVFAVLSAKDVSAQKKDSNAIILGSSLFPETNSTSWVSPSGLFAFGFHAQDNGFAVGIRLLGEHGGTIIWTPNLSNLSASSDSAIELTKYGQLLLRNEKLKKVILANAAEPADYASMLDSGNFVLYSKNDSVIWQSFDYPTDTILGGQNLSSAQELISANRHFLLQMQTDGNLVAYPMNNRTIDDAYWASDTFESQVSQLTLNLTGSLCLVDDDGNTTKVLANSSNYHGGNKNLMIYRATLDFDGIFRLYVHTFEKNNSFNVKRVWQSVSNQCEVKGFCGFNSYCSMNGDDDNEAVCECYPGFTPTNGNNNKSIKMFLDCEQRSKDDCKTSEDPKMLYDVVTLQHVQWSLVPYLVITLEMEACGNSCKEDCDCGAALHANGLCNKYRLPIRFGRINYDVTNTALFKFPETETIPPNQKKPEVIVDDKKNLILTLVITLASISFLCLVFAISIFFIYMRKVYSYTKLSAGSEKLRFTEDCSLRTFSFGELVNATGNFTEEIEHSTTMAMTSGYVAPERQKESSTSIKVDVYSYGVVLLEIICCRRNIDVNVASEEEMMLSSWVYNCFVRGELKKLVVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNLILMLEGLKEIPIPPSPIPLG 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1181 636 Gene3D - 148 284 - -
Lele21g1181 636 ProSiteProfiles Bulb-type lectin domain profile. 148 269 IPR001480 -
Lele21g1181 636 SMART blect_4 34 147 IPR001480 -
Lele21g1181 636 SUPERFAMILY alpha-D-mannose-specific plant lectins 158 257 IPR036426 -
Lele21g1181 636 Pfam D-mannose binding lectin 74 159 IPR001480 -
Lele21g1181 636 Gene3D - 26 145 IPR036426 -
Lele21g1181 636 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 508 - -
Lele21g1181 636 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 200 IPR036426 -
Lele21g1181 636 Pfam S-locus glycoprotein domain 238 313 IPR000858 GO:0048544
Lele21g1181 636 Pfam Protein kinase domain 509 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1181 636 Gene3D Transferase(Phosphotransferase) domain 1 478 629 - -
Lele21g1181 636 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Lele21g1181 636 SUPERFAMILY Protein kinase-like (PK-like) 493 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1181 Lele-ChrLele21 9677045 9679390 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1181 505 633 Receptor kinase-like Gene Family AT5G38280 37.500 5.33e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele21g1181 Pkinase 5.6e-08 CL0016