Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1176 ATGGAAAGTGACTATGTGGCACCTGAATGGCAGAGAGATGCATTAGCATCTGTTAAGGTTGACGTGTACAGCTATGGCGTGGTGCTGTTGGAGATCATATGTTGCAGAAGGAACATAGATGTGAATGTTCATTCAGAAGAGGAAATGATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAGAGGGGAATTAAAGAAACTAGTAGTGGATGAAGATGTGGAATGGAGGACATTGGAGAGAATGGTGAAGGTAGCGTTATGGTGTGTCCAAGAGGACTTGTCTCTGCGTCCTTCCATGAAGAATGTGATTTTGATGTTGGCAGGGTTAAAAGATATCACAATTCCTCCGTCTCCAATCCTACTTGCTTGA 369 0.4282 MESDYVAPEWQRDALASVKVDVYSYGVVLLEIICCRRNIDVNVHSEEEMMLSSWVYNCFVRGELKKLVVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLAGLKDITIPPSPILLA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1176 122 Gene3D Transferase(Phosphotransferase) domain 1 2 114 - -
Lele21g1176 122 Pfam Protein tyrosine and serine/threonine kinase 4 103 IPR001245 GO:0004672|GO:0006468
Lele21g1176 122 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 116 - -
Lele21g1176 122 SUPERFAMILY Protein kinase-like (PK-like) 4 106 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1176 Lele-ChrLele21 9599140 9600845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1176 5 122 Receptor kinase-like Gene Family AT5G38280 37.600 3.76e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele21g1176 PK_Tyr_Ser-Thr 6.9e-07 CL0016