Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1134 ATGCAATGCGGGAATCATGAATATGATGGTAATTCCTCTTTCAATCCTATGGTGTTGCCAGGTGATCATGTTTACCTTGCAGTATTAAATGCTGCTATTGAGCTGAACTTGTTTGAGATCATTGGTAAGGGAAGCTCTGAAGGCATGTCCTCCTCTGAAATTGCTTCCAACCTCCCATATCTACATGCCAACATAGCTCGTCGACTTGATCGAATGTTGTTTTTGCTTTCTAATTACTCTCTCTTAATTTGTTCTTCCAACAAACTTGATCATGGTGGTATTGCGAGGCTTTATGGTCTATCTCCTATTGGTAAATACTTAATCCCTGATGAGGATGGAGCCTCCTGTGTTGAATTGTTCAAATTATGTTGTCATCCCTCTTACGTGAAAATTTGGCAAAACTTCAAGCAAGTGATTCTTGATGAGGAAGGGGACTTGTTCAAGAAAGTTCATGGGATGTCTATGTTTGAATATATGGAAATAGATCCAAAGTTTAAAACTATTTTTCATAAGGCCATGGCTGATATGTCAATCATGCAGATGAAGGATGTGCTTGAAACATATAAAGGATTTGAGGGAATATCAACACTTGTTGATGTGGCTGGTGGCATTGGCCAAAGCCTCAAAATGATCATCTCCAAGTATCCTTCAATTCAGGGCATTAACTTTGACTTGTCACATGTGGTACAACATGCACTATCCCATCCAGGAATGAAGCATGTCGGAGGAGATATGTTCAAAAGTGTCCCACAAGGCGATGCTATAATGATGAAGCTTATAACTCATAACTGGAGAGAAGAACACTGCATACAAATTTTAAAAAACTGCCATAGATCTCTGAATAATGAAGGCAAGCTTATTATTATTGACGTGATAATGCCAGAAATTCCTAATGGAAGCCATGTGCATAAGTATGCTTCAGTTCTTGACAACCTCATGTTTCTGCAATCTGGTGGGAAAGAAAGAACTGAGAAAGAATTTGAAGCTCTTTGCAAAGCAAGTGGCTTTTCTAGCTACCGTATCGCAGCTCGTGACGTTAACTCCTCTCCTTTGGGAGTCATTGAGTTTTATAAATAA 1077 0.3909 MQCGNHEYDGNSSFNPMVLPGDHVYLAVLNAAIELNLFEIIGKGSSEGMSSSEIASNLPYLHANIARRLDRMLFLLSNYSLLICSSNKLDHGGIARLYGLSPIGKYLIPDEDGASCVELFKLCCHPSYVKIWQNFKQVILDEEGDLFKKVHGMSMFEYMEIDPKFKTIFHKAMADMSIMQMKDVLETYKGFEGISTLVDVAGGIGQSLKMIISKYPSIQGINFDLSHVVQHALSHPGMKHVGGDMFKSVPQGDAIMMKLITHNWREEHCIQILKNCHRSLNNEGKLIIIDVIMPEIPNGSHVHKYASVLDNLMFLQSGGKERTEKEFEALCKASGFSSYRIAARDVNSSPLGVIEFYK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1134 358 PANTHER O-METHYLTRANSFERASE 26 343 IPR016461 GO:0008168
Lele21g1134 358 Pfam Dimerisation domain 28 76 IPR012967 GO:0046983
Lele21g1134 358 CDD AdoMet_MTases 196 293 - -
Lele21g1134 358 PIRSF O-mtase 8 358 IPR016461 GO:0008168
Lele21g1134 358 FunFam Caffeic acid 3-O-methyltransferase 4 107 - -
Lele21g1134 358 SUPERFAMILY "Winged helix" DNA-binding domain 23 112 IPR036390 -
Lele21g1134 358 Gene3D Vaccinia Virus protein VP39 108 358 IPR029063 -
Lele21g1134 358 Gene3D - 2 107 IPR036388 -
Lele21g1134 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 342 IPR029063 -
Lele21g1134 358 Pfam O-methyltransferase domain 132 337 IPR001077 GO:0008171
Lele21g1134 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1134 Lele-ChrLele21 8646150 8648998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1134 9 341 Monolignol Biosynthesis Gene Families AT5G54160 49.401 2.87e-110 324