Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1124 ATGGCTATCGCTGTTTTGGCTTTTATGCTATTACTGCAGTTGCCGAGAATTTTTGGCTTTGGGGATTTGTTGCAGTCAAAGGATTGTGGTGCGAATTGGGTAGCCTATTCATATTCTCATGGTGAAGAACTATTTTACATAAACGGGAATGTTGTTAGTAAAGATACTTTCTGCAAGACCCTTCAGTTGTATATGGTAAATGGTTGTGATGCGAAGTACTATTTTGGAAGTACAAGCTGTGGGCTGGAAGTTTCTTTTGGAAGAAAGCTTTTGCAGAAGGATATAAGCAATAACTCAACATTCCCAGGTCATAAGAACGTTTCTATACCCTTATCAGCCTCGAAAGTTGATATAGCTGCAAGTGGAGTTTTGTTTGTATGTTGTGTTTTTCTTTGTCCTTGTTTCTATGGGAAGAAACAAAAAGCCACTGCTCATGCTGGTCTGTCCAAGGACCCAAATTCAATGGATTTAGCTTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGACCCCCCAGGGCTGTCTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTCGGGTCAATACATCTCAACTTGAGTCAGGTTATAAAAGCTACTCATAATTTCTCGAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTTTACAAGGCTCAGCTAGAAGGCGGTCAGGTTGTGGCAGTAAAGCGTGCCAAAAGGGAACAATTTGAGAATTTGAAAACTGAATTCAGCAGTAAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATTGCAGAGTATGTCCCAAATGGTACTCTTAGAGAACACTTGGATGGTTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCTTGACCTATCTACATCGTTACGCAGAAAAGCCAATTATCCATAGAGATGTGAGATCATCCAACATTCTTCTAACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAGTGGATTCTGATCAAACACACATATCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCAGAGTACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTATAGAAATTGTGACCGGCCGCCGTCCTGTGGAGGTGAAGAAACCTGTTGAAGAGAGGGTCACATTGAGATGGGCTTTCAGGAAGTATACTGAAGGAAATGTGGCAGAAATGGCGGATCCTTTAATGGAGGAAGGTATAAATGGAGAGGTTCTAATGAAGATGATTGGTTTAGCAATTCAATGTGCAGCACCGAGTCGAGCTGATCGGCCTGACATGAAATCGGTGGGAGAACAGTTGTGGACGATCAGGGCAGAATTCCTCAAGAGTTCAAAGAAAATATAA 1494 0.4123 MAIAVLAFMLLLQLPRIFGFGDLLQSKDCGANWVAYSYSHGEELFYINGNVVSKDTFCKTLQLYMVNGCDAKYYFGSTSCGLEVSFGRKLLQKDISNNSTFPGHKNVSIPLSASKVDIAASGVLFVCCVFLCPCFYGKKQKATAHAGLSKDPNSMDLASSLEGNSVSEKTPQGCLHRVPPSPSRFSMSPKLSRLGSIHLNLSQVIKATHNFSNKLQIGEGGFGTVYKAQLEGGQVVAVKRAKREQFENLKTEFSSKVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVRSSNILLTESMRAKVADFGFARLGPVDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLIEIVTGRRPVEVKKPVEERVTLRWAFRKYTEGNVAEMADPLMEEGINGEVLMKMIGLAIQCAAPSRADRPDMKSVGEQLWTIRAEFLKSSKKI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1124 497 Gene3D Phosphorylase Kinase; domain 1 183 287 - -
Lele21g1124 497 ProSitePatterns Tyrosine protein kinases specific active-site signature. 332 344 IPR008266 GO:0004672|GO:0006468
Lele21g1124 497 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 112 489 - -
Lele21g1124 497 ProSiteProfiles Protein kinase domain profile. 211 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1124 497 MobiDBLite consensus disorder prediction 159 183 - -
Lele21g1124 497 Pfam Protein tyrosine and serine/threonine kinase 215 483 IPR001245 GO:0004672|GO:0006468
Lele21g1124 497 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 288 497 - -
Lele21g1124 497 Gene3D Transferase(Phosphotransferase) domain 1 288 496 - -
Lele21g1124 497 SMART tyrkin_6 211 483 IPR020635 GO:0004713|GO:0006468
Lele21g1124 497 SUPERFAMILY Protein kinase-like (PK-like) 193 486 IPR011009 -
Lele21g1124 497 CDD STKc_IRAK 217 483 - -
Lele21g1124 497 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1124 Lele-ChrLele21 8498329 8502398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1124 125 487 Receptor kinase-like Gene Family AT3G46290 39.394 9.46e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele21g1124 PK_Tyr_Ser-Thr 7e-49 CL0016