Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1116 ATGCAATCCCGGGTCATTGTTCTTCATGTAAATCCTGATTCAAGATTTATGGTTTTCAATGTTGCACAGTATCTTGGGATGACTGGGAATGGCTACGTATGGATAGCCACAGACTGTCTCTCCTCTATTGTGGATTTTACTTTTCTTTCTTCAGATGCAATGAGTGTTCTTCAAGGCGTTCTTCTTTTATGCCAACATACTCTTGATTCAGATGAAAAAAAAATTATGTCTAGGTGGAACAAGTTAACTAGAGGCTCTGTAGGGTTAAGTTCTTATGGCCTTCATGCATATGATACTGTTTGGCTACTTGCAAATGCTATTGATACATTCTTTAACCAGGGTGCGATTATATCATTTTCTAACGACTCCAGGATACATGATGTTGATGAAGGTAATCTTAACCATGAGGCAATAAGCATTTTTTGGCAATGGAACGCTTCTCTTCAACAACATATTGCAGAGTAA 465 0.3785 MQSRVIVLHVNPDSRFMVFNVAQYLGMTGNGYVWIATDCLSSIVDFTFLSSDAMSVLQGVLLLCQHTLDSDEKKIMSRWNKLTRGSVGLSSYGLHAYDTVWLLANAIDTFFNQGAIISFSNDSRIHDVDEGNLNHEAISIFWQWNASLQQHIAE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1116 154 SUPERFAMILY Periplasmic binding protein-like I 2 114 IPR028082 -
Lele21g1116 154 Pfam Receptor family ligand binding region 2 113 IPR001828 -
Lele21g1116 154 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 119 - -
Lele21g1116 154 Gene3D - 62 117 - -
Lele21g1116 154 Gene3D - 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1116 Lele-ChrLele21 8295347 8295811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1116 1 141 Ion Channels AT1G42540 47.917 5.38e-38 135