Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1111 ATGAATGCTAATTCTTGGCTAACGATCGGAAAAGGACTGGAAATCTCCTCTGTATTATTGTCCCCTTCCCCAGTTTCCGTCATTGTAGCATCGAGCAGAGAGGTTGTGGAGGGACTTCGTTCGTCGGAGGCATATTTTGGACTCGTAGTTCTCTTATTATTTACTCCATGGTCGTATGTTATCATCAGACACATTGAGCAGCGAGTGAATTCAAACTCACAAAATATACTTTCAGAGTTGCAATCTGAAATTTACCACTCTGCCAAACTATTGCACCCCTTGAATTCATCATCAACCAATTTAGCTCGCCTTCTGGGTTCAACCTTCAACAAGACGACTAATGTCTCCTTCTTTGACATTCAGACCAAAGTGGCTCCAGTGTTGTTTCAAGCACTTCAGATGATTCCTTACTTGACTGAGATCTCATACATTGGTGTAGAGGGTCTCTTCTTCTCATACTACATCGATCATAATCGAACTCTTGCATTGTACTCTAACTCTTCGCTTTCTTCAAAAACTGTGTATTATGTTCAACCTATAAACCCTGGCACTGGACGATTATATGGTGAATCCAGAATATATGAACCTCTTATTAATGCAAGTTGGATTCAGGAAGCAATGAATAGTACTTCCCATAGATATTCCTCATTAGGTTGCATGTGGAGCTATGATCATCAAGTTTTATATGTTAATTCAGTGAGAATATCAAGAACTACAGGAGTGATCTCATTAGGGTTTGAAGCAACTTCAATTATTGATTTTCTCAATCCTATTGGGCGTCAAGGTGCAAGTTTATTGTATTTGGCTTCCAAACATGATGGGAAAGTAATTCTTGAAGGATTCCAAAGAGCCCAAATAGTATTCTCTAATGATACAGCCTCCTTCCATTTAGTGAAATCAAATGGTGACCAAACGAGTTATCAAAGCTCCGTTTCATGCAAGGATGAAGCCTCTGCTTCTGTTTTAAAAATTGGGGACACTCATTATTTGATTCGCTGCTCATCAATTGATGTAATGGGAGTAGAATCAGTTTATGTCATAGCTATACCACAAAATGGATTGGTGGCCTTTGTACATAAGAGTGGAAGACTGGGGTTAGTGCTAATGAGTTCTATGACAGTTACTATATTTATTTCCATCTCCAGTTTTCTGTTGTTAAATGCTATAATGGGTTGGCGAGAGATTCATTTGTGTGCCTCTCTAATCAAACAAATGGAAGCTACTCAACAAGCTGAGAGGAAAAGTATGAACAGGAGTCTTGCATTTTCCAGTGCAACCCATGATATTCGTGCTTCTCTTGCTGGCCTTATTGGTTTGGTAGAGATGTCTTGTGAAGAACTTGTCCCTGATTCAGAACTAGAGATCAATTTAAAGCAAATGGGTGCTTGTATAAAAGATTTGCAAGGGCTATTGAATTCTGTTCTTGATACAAGTAAAATTGAGGCAGGGAAAATGCAACTTGATGAACAGGAATTTGATCTATCACAGTTCATAGAAGATAAAGTTGACTTATTTCATCCTGTGGCTATGAAGAAAGGTGTAGATCTTGTATTGGACCACTGTGATGGTTCATTTATCAGATATTCATGCGTAAAAGGCGACAAAGGAAAGCTTCAACAAGTTTTGTGTAATTTATTGAGTAATGCTGTTAAATTTACTGATAAAGGTCACATAGTAGTTCGAGCTTGGGTTCAAAAACCAAATTTTCAGAACTCAATAATTTCTACTCACAGATTCAACAGTTTCATGAAACTCTGCTTGTCACGCGTATTATTTCGCAAACAAAATGAAGCAGATGTTCATGTAGAAGCCATGAATAACAAAATCCAACGAGATTCAAACTACTTGGAGTTTGTGTTTGAAGTGGATGACACTGGAAAAGGGATTCCTAAAGAGAAGCAAGCTTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAAACTGCTTTAGGACTAGAAGGCACTGGCTTGGGACTTGGTATTGTGCAATCACTGGTTCATTTGATGCATGGAGATATTGGAATTGTGGACAAGGAAATTGGTGAAAAAGGAACATGCTTTAGATTCAGTGTCCTCCTAGCAGTAAGTGAAACAGTCACTGGTATCAATAATAGTACTAGGGAAGGTAATGATTTGAATCAACATCAAGAACAAGATATAAAAGAAACTAGTTCTGGTTCTCGCATATGCTCCCCAAGTCCAAGATTACCTATTTTTGCCTCTAATAAGTTAGCAGATTCTCAAGTTGTTATTCTGATTCACAATGAGGGGCGTCGAAGGATTACCAAAAGGTTCATGGAGAGATTAGGGATTAAAGTTAAGATTGTGAAGAAGTTGGAACATTTGTCTCATACTCTCAAGAAGATCAAGCAAAAGCAGTGCAATTCCAGCCCAAGCTCGGCAGGAACATCATCATATATGAGTTCTGATCGGTCTACACCTCACAATTATAATAATTCTAGAGGCAAAGGATTTCCTTTGAGTGCTGCAGATGGATCCTCAGACTTTATCTCTTCAGTTTTTAACAAGTTAGAAGATGGAGTTTCCATGGGTTTAGTTCTGCTTGTGATTGATGCATTAGCAGCACCGTTTGAAGAACTTGGCATAATGATATTAGATTTCAGAAGAGGCCTCAGAAATCCTTGCAAGGTTGTTTGGTTAAATAAGCCACTTGCGTGCAACGTCGATGAAAATGTGATTGATCCAAATGATGACATTGTCCTGTCTAAACCATTACATGGTACTCGTTTGTTTAACATTATCAGGCTTCTTCCTGAGTTTGGTGGTGGAATTGGAAGGGCAAGTAGAAACAGTTTTCACAACACAATGAGAAAAACATTGAAGAAATCCTCTGTATCAAGATATCAATCACCCCCATTTCAAGATGTTGAACTACAAGATTGTGATGATAGTGCATGGAGGATGGAACAACTGCAATATTCTAATGGTAAGTCCAAGGCAAGGAATATTTCTCAAGTTGATCATCATGGAGGGATACAAGAATGTGGCACTTCAACTAGTGCCAAGCCCTTGAGCGGAAAAAGATTTTTGGTTGTTGATGACACTGAATATCTACGTATGATAGCTTTGAAGACTTTGAAAAAGCTAGGCGCGACAAGTATGGGATGTAGCAATGGTGAAGATGCAGTGAACCTAGTTGAAGATACTCTAACCAGGGCTTCCCCGAATCCTCCTTATGATTATATCATAATGGATTGTGAGATGCCGGTGATGGACGGATTTGAGGCAACAATGAAGATAAGGAAGATGGAGAAGAGTTATGGGTTTTACATCCCTATCATGGCATTAACAGCTCATACGTCAGAGAAGGAGACAAATAAGATCAAAGAGACAGGAATGGATGCTCATTTAAGTAAGCCACTGAAGAAAGAGCATTTACTGGATGCCGTCAGATATATTGACAGTAAATTGTGTCAACATGTCTGA 3444 0.387 MNANSWLTIGKGLEISSVLLSPSPVSVIVASSREVVEGLRSSEAYFGLVVLLLFTPWSYVIIRHIEQRVNSNSQNILSELQSEIYHSAKLLHPLNSSSTNLARLLGSTFNKTTNVSFFDIQTKVAPVLFQALQMIPYLTEISYIGVEGLFFSYYIDHNRTLALYSNSSLSSKTVYYVQPINPGTGRLYGESRIYEPLINASWIQEAMNSTSHRYSSLGCMWSYDHQVLYVNSVRISRTTGVISLGFEATSIIDFLNPIGRQGASLLYLASKHDGKVILEGFQRAQIVFSNDTASFHLVKSNGDQTSYQSSVSCKDEASASVLKIGDTHYLIRCSSIDVMGVESVYVIAIPQNGLVAFVHKSGRLGLVLMSSMTVTIFISISSFLLLNAIMGWREIHLCASLIKQMEATQQAERKSMNRSLAFSSATHDIRASLAGLIGLVEMSCEELVPDSELEINLKQMGACIKDLQGLLNSVLDTSKIEAGKMQLDEQEFDLSQFIEDKVDLFHPVAMKKGVDLVLDHCDGSFIRYSCVKGDKGKLQQVLCNLLSNAVKFTDKGHIVVRAWVQKPNFQNSIISTHRFNSFMKLCLSRVLFRKQNEADVHVEAMNNKIQRDSNYLEFVFEVDDTGKGIPKEKQASVFENYVQVKETALGLEGTGLGLGIVQSLVHLMHGDIGIVDKEIGEKGTCFRFSVLLAVSETVTGINNSTREGNDLNQHQEQDIKETSSGSRICSPSPRLPIFASNKLADSQVVILIHNEGRRRITKRFMERLGIKVKIVKKLEHLSHTLKKIKQKQCNSSPSSAGTSSYMSSDRSTPHNYNNSRGKGFPLSAADGSSDFISSVFNKLEDGVSMGLVLLVIDALAAPFEELGIMILDFRRGLRNPCKVVWLNKPLACNVDENVIDPNDDIVLSKPLHGTRLFNIIRLLPEFGGGIGRASRNSFHNTMRKTLKKSSVSRYQSPPFQDVELQDCDDSAWRMEQLQYSNGKSKARNISQVDHHGGIQECGTSTSAKPLSGKRFLVVDDTEYLRMIALKTLKKLGATSMGCSNGEDAVNLVEDTLTRASPNPPYDYIIMDCEMPVMDGFEATMKIRKMEKSYGFYIPIMALTAHTSEKETNKIKETGMDAHLSKPLKKEHLLDAVRYIDSKLCQHV 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1111 1147 Gene3D - 993 1142 - -
Lele21g1111 1147 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 405 485 IPR036097 GO:0000155|GO:0007165
Lele21g1111 1147 ProSiteProfiles Histidine kinase domain profile. 424 694 IPR005467 -
Lele21g1111 1147 SMART HKATPase_4 533 694 IPR003594 -
Lele21g1111 1147 MobiDBLite consensus disorder prediction 703 728 - -
Lele21g1111 1147 MobiDBLite consensus disorder prediction 789 820 - -
Lele21g1111 1147 PRINTS Bacterial sensor protein C-terminal signature 636 646 IPR004358 GO:0016310|GO:0016772
Lele21g1111 1147 PRINTS Bacterial sensor protein C-terminal signature 618 632 IPR004358 GO:0016310|GO:0016772
Lele21g1111 1147 PRINTS Bacterial sensor protein C-terminal signature 652 670 IPR004358 GO:0016310|GO:0016772
Lele21g1111 1147 ProSiteProfiles Response regulatory domain profile. 1014 1140 IPR001789 GO:0000160
Lele21g1111 1147 Gene3D - 404 484 - -
Lele21g1111 1147 Gene3D - 485 699 IPR036890 -
Lele21g1111 1147 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 472 690 IPR036890 -
Lele21g1111 1147 SMART REC_2 1013 1136 IPR001789 GO:0000160
Lele21g1111 1147 CDD HisKA 418 479 IPR003661 GO:0000155|GO:0007165
Lele21g1111 1147 CDD REC_hyHK_CKI1_RcsC-like 1015 1136 - -
Lele21g1111 1147 SUPERFAMILY CheY-like 1009 1138 IPR011006 -
Lele21g1111 1147 SMART HisKA_10 417 483 IPR003661 GO:0000155|GO:0007165
Lele21g1111 1147 PANTHER TWO-COMPONENT HISTIDINE KINASE 75 1137 - -
Lele21g1111 1147 Pfam Response regulator receiver domain 1016 1136 IPR001789 GO:0000160
Lele21g1111 1147 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 692 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1111 Lele-ChrLele21 8157624 8163479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1111 67 1142 Histidine Kinase Gene Family AT2G47430 37.959 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele21g1111 HATPase_c 8.5e-23 CL0025